RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 ATP4AP20648 1035 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 MARK3P27448 753 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 CST5P28325 142 aaPredicted RBP9.33□□□□□ -0.92
GPC3-203ENST00000406757 TXLNAP40222 546 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 STAT6P42226 847 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 AFMP43652 599 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 CDK7P50613 346 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 JAK3P52333 1124 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 FAM160A1Q05DH4 1040 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 MCM6Q14566 821 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 TMEM119Q4V9L6 283 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 NAALADL2Q58DX5 795 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 GNASQ5JWF2 1037 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 MFSD5Q6N075 450 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 CAVIN1Q6NZI2 390 aaKnown RBP9.33□□□□□ -0.92
GPC3-203ENST00000406757 MIS18BP1Q6P0N0 1132 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 C16orf59Q7L2K0 433 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 TLK2Q86UE8 772 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 PCSK9Q8NBP7 692 aaKnown RBP9.33□□□□□ -0.92
GPC3-203ENST00000406757 GIMAP8Q8ND71 665 aaPredicted RBP9.33□□□□□ -0.92
GPC3-203ENST00000406757 TIFAQ96CG3 184 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 LXNQ9BS40 222 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 POLR3CQ9BUI4 534 aaPredicted RBP9.33□□□□□ -0.92
GPC3-203ENST00000406757 PPP1R12CQ9BZL4 782 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 AP5M1Q9H0R1 490 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 ZNF576Q9H609 170 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 SPC25Q9HBM1 224 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 ZNF302Q9NR11 478 aa9.33□□□□□ -0.92
GPC3-203ENST00000406757 MROH7Q68CQ1 1323 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 XIRP2A4UGR9 3374 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 NPHP3-ACAD11A0A0J9YXS1 232 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 A0A0U1RQG5 324 aaPredicted RBP9.32□□□□□ -0.92
GPC3-203ENST00000406757 FAM237AA0A1B0GTK4 181 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 GRXCR1A8MXD5 290 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 RBAK-RBAKDNI3L0D1 243 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 ARVCFO00192 962 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
GPC3-203ENST00000406757 ZNF862O60290 1169 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 P4HBP07237 508 aaKnown RBP9.32□□□□□ -0.92
GPC3-203ENST00000406757 MMP3P08254 477 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 MYL3P08590 195 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 CSF2RAP15509 400 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 RPA1P27694 616 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 SFNP31947 248 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 PBX2P40425 430 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 QARSP47897 775 aaKnown RBP9.32□□□□□ -0.92
GPC3-203ENST00000406757 GJA9P57773 515 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 E2F4Q16254 413 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 TMEM240Q5SV17 173 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 HAUS3Q68CZ6 603 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 PLA2G4FQ68DD2 849 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 PDXDC2PQ6P474 469 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 KRBA2Q6ZNG9 492 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 FAM126BQ8IXS8 530 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 CKAP2LQ8IYA6 745 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 SMAP1Q8IYB5 467 aaPredicted RBP9.32□□□□□ -0.92
GPC3-203ENST00000406757 CNNM3Q8NE01 707 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 GLG1Q92896 1179 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 GZF1Q9H116 711 aaPredicted RBP9.32□□□□□ -0.92
GPC3-203ENST00000406757 UPF3AQ9H1J1 476 aaKnown RBP9.32□□□□□ -0.92
GPC3-203ENST00000406757 BLZF1Q9H2G9 400 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 BLOC1S4Q9NUP1 217 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 TMEM63CQ9P1W3 806 aa9.32□□□□□ -0.92
GPC3-203ENST00000406757 IGKV6D-21A0A0A0MT36 114 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 NKRFO15226 690 aaKnown RBP eCLIP9.31□□□□□ -0.92
GPC3-203ENST00000406757 CTAGE5O15320 804 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 KINO60870 393 aaKnown RBP9.31□□□□□ -0.92
GPC3-203ENST00000406757 STBD1O95210 358 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 MBD3O95983 291 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 LGALS2P05162 132 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 PLA2G4BP0C869 781 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 CYP2C18P33260 490 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 STAT5BP51692 787 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 NPEPPSP55786 919 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 PSMC5P62195 406 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 RAD51AP2Q09MP3 1159 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 PPIGQ13427 754 aaKnown RBP eCLIP9.31□□□□□ -0.923e-23■□□□□ 9
GPC3-203ENST00000406757 PNOCQ13519 176 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 HYIQ5T013 277 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 ISM2Q6H9L7 571 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 ZNF365Q70YC5 407 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 MAEAQ7L5Y9 396 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 CEP57L1Q8IYX8 460 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 TMEM199Q8N511 208 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 IQUBQ8NA54 791 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 PPTC7Q8NI37 304 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 PPM1EQ8WY54 764 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 RAD54LQ92698 747 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 ZBTB10Q96DT7 871 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 PAGE5Q96GU1 130 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 MTRQ99707 1265 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 PBX4Q9BYU1 374 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 RNPEPQ9H4A4 650 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 AZI2Q9H6S1 392 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 ZSWIM4Q9H7M6 989 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 TUFT1Q9NNX1 390 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 PRDM6Q9NQX0 595 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 DNM3Q9UQ16 869 aa9.31□□□□□ -0.92
GPC3-203ENST00000406757 MYMKA6NI61 221 aa9.3□□□□□ -0.92
GPC3-203ENST00000406757 A6NJR5 290 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms