RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 DDX3YO15523 660 aaKnown RBP10.77□□□□□ -0.69
MSH2-202ENST00000406134 GH2P01242 217 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 PPATQ06203 517 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 PPFIA1Q13136 1202 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 CDAN1Q8IWY9 1227 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 CCDC43Q96MW1 224 aaKnown RBP10.77□□□□□ -0.69
MSH2-202ENST00000406134 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.77□□□□□ -0.69
MSH2-202ENST00000406134 OSGEPQ9NPF4 335 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 GCNT4Q9P109 453 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 DNM3Q9UQ16 869 aa10.77□□□□□ -0.69
MSH2-202ENST00000406134 IRX3P78415 501 aaPredicted RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 HDLBPQ00341 1268 aaKnown RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 CCDC181Q5TID7 509 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 DDX42Q86XP3 938 aaKnown RBP eCLIP10.76□□□□□ -0.69
MSH2-202ENST00000406134 C10orf67Q8IYJ2 551 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 ATP8B4Q8TF62 1192 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 TAS2R14Q9NYV8 317 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 SERPINA10Q9UK55 444 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 A0A0A6YYK5 440 aaPredicted RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 EIF3DO15371 548 aaKnown RBP eCLIP10.76□□□□□ -0.692e-6■■■□□ 16.1
MSH2-202ENST00000406134 ABCB5Q2M3G0 1257 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 C1orf220Q5T0J3 134 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 ALKBH5Q6P6C2 394 aaKnown RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 PACS2Q86VP3 889 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 SPICE1Q8N0Z3 855 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 ACER1Q8TDN7 264 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 DYDC2Q96IM9 177 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 PRMT6Q96LA8 375 aaPredicted RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 TRIM34Q9BYJ4 488 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 TXLNGYQ9BZA5 131 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 TDRD3Q9H7E2 651 aaKnown RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 BMP2KQ9NSY1 1161 aaPredicted RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 COG5Q9UP83 839 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 XRCC5P13010 732 aaKnown RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 DCAF17Q5H9S7 520 aaPredicted RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 TEX2Q8IWB9 1127 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 ZSWIM2Q8NEG5 633 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 MASTLQ96GX5 879 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 RNPC3Q96LT9 517 aaKnown RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 ISCUQ9H1K1 167 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 EPB41L4BQ9H329 900 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 NOC2LQ9Y3T9 749 aaKnown RBP10.76□□□□□ -0.69
MSH2-202ENST00000406134 PHIPQ8WWQ0 1821 aa10.76□□□□□ -0.69
MSH2-202ENST00000406134 PCNTO95613 3336 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 EVI5O60447 810 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 BMP3P12645 472 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 PAFAH1B1P43034 410 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 GUCY2FP51841 1108 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 ITGB3BPQ13352 177 aaPredicted RBP10.75□□□□□ -0.69
MSH2-202ENST00000406134 C10orf76Q5T2E6 689 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 ARHGEF26Q96DR7 871 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 CAPS2Q9BXY5 557 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 ZHX3Q9H4I2 956 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 RABGAP1Q9Y3P9 1069 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 KCNK3O14649 394 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 GCNT3O95395 438 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 KCTD16Q68DU8 428 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 KDM7AQ6ZMT4 941 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 ZNF720Q7Z2F6 126 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 IFT20Q8IY31 132 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 C1orf131Q8NDD1 294 aaKnown RBP10.75□□□□□ -0.69
MSH2-202ENST00000406134 AP1M1Q9BXS5 423 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 RANBP17Q9H2T7 1088 aaKnown RBP10.75□□□□□ -0.69
MSH2-202ENST00000406134 UNC45AQ9H3U1 944 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 PGAP2Q9UHJ9 254 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 RSPH14Q9UHP6 348 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 CALUO43852 315 aaPredicted RBP10.75□□□□□ -0.69
MSH2-202ENST00000406134 RAD21O60216 631 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 MCCD1P59942 119 aaPredicted RBP10.75□□□□□ -0.69
MSH2-202ENST00000406134 SPP2Q13103 211 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 PHLDB3Q6NSJ2 640 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 ZDHHC14Q8IZN3 488 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 PLEKHO2Q8TD55 490 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 RABEP2Q9H5N1 569 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 ERVK-5Q9HDB9 667 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 CWC15Q9P013 229 aaKnown RBP10.75□□□□□ -0.69
MSH2-202ENST00000406134 PPP1R9AQ9ULJ8 1098 aa10.75□□□□□ -0.69
MSH2-202ENST00000406134 TISP43B9A030 160 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 MARCH6O60337 910 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 ARP10275 920 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 HSD17B3P37058 310 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 DLG4P78352 724 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 PDCLQ13371 301 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 UBAP2Q5T6F2 1119 aaKnown RBP10.74□□□□□ -0.69
MSH2-202ENST00000406134 IFT81Q8WYA0 676 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 TAF1DQ9H5J8 278 aaPredicted RBP10.74□□□□□ -0.69
MSH2-202ENST00000406134 TUFT1Q9NNX1 390 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 SUCLA2Q9P2R7 463 aaPredicted RBP10.74□□□□□ -0.69
MSH2-202ENST00000406134 GFPT2O94808 682 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 CPP00450 1065 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 FOSP01100 380 aaPredicted RBP10.74□□□□□ -0.69
MSH2-202ENST00000406134 MMP10P09238 476 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 VIL1P09327 827 aaKnown RBP10.74□□□□□ -0.69
MSH2-202ENST00000406134 ALDH1B1P30837 517 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 FMO5P49326 533 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 GALCP54803 685 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 GNGT1P63211 74 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 KLHL7Q8IXQ5 586 aa10.74□□□□□ -0.69
MSH2-202ENST00000406134 EIF1ADQ8N9N8 165 aaKnown RBP10.74□□□□□ -0.69
MSH2-202ENST00000406134 DDX47Q9H0S4 455 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms