RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 PRDM5Q9NQX1 630 aaPredicted RBP32.68■■■□□ 2.82
USP42-202ENST00000404008 LTBP2Q14767 1821 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 TRIM43BA6NCK2 446 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 DGAT1O75907 488 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 RBL2Q08999 1139 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 EMC2Q15006 297 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 RPAINQ86UA6 219 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 LRRC71Q8N4P6 559 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 PDILTQ8N807 584 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 CAGE1Q8TC20 777 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 DNAJB3Q8WWF6 145 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 RAD54LQ92698 747 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 TRIM43Q96BQ3 446 aaPredicted RBP32.67■■■□□ 2.82
USP42-202ENST00000404008 STK17AQ9UEE5 414 aa32.67■■■□□ 2.82
USP42-202ENST00000404008 PLA2G4BP0C869 781 aa32.66■■■□□ 2.82
USP42-202ENST00000404008 NAALADL2Q58DX5 795 aa32.66■■■□□ 2.82
USP42-202ENST00000404008 PADI6Q6TGC4 694 aa32.66■■■□□ 2.82
USP42-202ENST00000404008 KIAA0319LQ8IZA0 1049 aa32.66■■■□□ 2.82
USP42-202ENST00000404008 CCDC155Q8N6L0 562 aa32.66■■■□□ 2.82
USP42-202ENST00000404008 SYT2Q8N9I0 419 aaPredicted RBP32.66■■■□□ 2.82
USP42-202ENST00000404008 FAM49AQ9H0Q0 323 aaPredicted RBP32.66■■■□□ 2.82
USP42-202ENST00000404008 HIPK3Q9H422 1215 aa32.66■■■□□ 2.82
USP42-202ENST00000404008 SUGCTQ9HAC7 445 aa32.66■■■□□ 2.82
USP42-202ENST00000404008 BMP2KQ9NSY1 1161 aaPredicted RBP32.66■■■□□ 2.82
USP42-202ENST00000404008 SIP14410 1827 aa32.66■■■□□ 2.82
USP42-202ENST00000404008 FAM237AA0A1B0GTK4 181 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 A0A1B0GVL5 298 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 PITPNM1O00562 1244 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 USO1O60763 962 aaKnown RBP32.65■■■□□ 2.82
USP42-202ENST00000404008 RPLP2P05387 115 aaKnown RBP32.65■■■□□ 2.82
USP42-202ENST00000404008 PFKFB1P16118 471 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 STAT6P42226 847 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 CLCN3P51790 818 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 SLC12A3P55017 1021 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 MKRN4PQ13434 485 aaPredicted RBP32.65■■■□□ 2.82
USP42-202ENST00000404008 BFSP2Q13515 415 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 LARP4BQ92615 738 aaKnown RBP32.65■■■□□ 2.82
USP42-202ENST00000404008 ATP6V0A4Q9HBG4 840 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 XPNPEP1Q9NQW7 623 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 HPSEQ9Y251 543 aa32.65■■■□□ 2.82
USP42-202ENST00000404008 GAS2O43903 313 aaKnown RBP32.64■■■□□ 2.82
USP42-202ENST00000404008 CKBP12277 381 aa32.64■■■□□ 2.82
USP42-202ENST00000404008 TMOD1P28289 359 aa32.64■■■□□ 2.82
USP42-202ENST00000404008 THPOP40225 353 aa32.64■■■□□ 2.82
USP42-202ENST00000404008 E2F4Q16254 413 aa32.64■■■□□ 2.82
USP42-202ENST00000404008 MRPS27Q92552 414 aaKnown RBP32.64■■■□□ 2.82
USP42-202ENST00000404008 MTRQ99707 1265 aa32.64■■■□□ 2.82
USP42-202ENST00000404008 KCNH3Q9ULD8 1083 aa32.64■■■□□ 2.82
USP42-202ENST00000404008 GOLGA6L4A6NEF3 574 aa32.63■■■□□ 2.81
USP42-202ENST00000404008 CAND2O75155 1236 aa32.63■■■□□ 2.81
USP42-202ENST00000404008 DRP2Q13474 957 aa32.63■■■□□ 2.81
USP42-202ENST00000404008 TPRNQ4KMQ1 711 aa32.63■■■□□ 2.81
USP42-202ENST00000404008 RSPH3Q86UC2 560 aa32.63■■■□□ 2.81
USP42-202ENST00000404008 FSIP1Q8NA03 581 aa32.63■■■□□ 2.81
USP42-202ENST00000404008 PRKAG2Q9UGJ0 569 aa32.63■■■□□ 2.81
USP42-202ENST00000404008 UMODL1Q5DID0 1318 aa32.62■■■□□ 2.81
USP42-202ENST00000404008 POLR2DO15514 142 aaKnown RBP32.62■■■□□ 2.81
USP42-202ENST00000404008 SSBP05455 408 aaKnown RBP eCLIP32.62■■■□□ 2.81
USP42-202ENST00000404008 CYP11B2P19099 503 aa32.62■■■□□ 2.81
USP42-202ENST00000404008 DNM2P50570 870 aa32.62■■■□□ 2.81
USP42-202ENST00000404008 MCM6Q14566 821 aa32.62■■■□□ 2.81
USP42-202ENST00000404008 RINT1Q6NUQ1 792 aa32.62■■■□□ 2.81
USP42-202ENST00000404008 NME8Q8N427 588 aa32.62■■■□□ 2.81
USP42-202ENST00000404008 PPP1R12CQ9BZL4 782 aa32.62■■■□□ 2.81
USP42-202ENST00000404008 GOLPH3LQ9H4A5 285 aa32.62■■■□□ 2.81
USP42-202ENST00000404008 TIMP1P01033 207 aa32.61■■■□□ 2.81
USP42-202ENST00000404008 ITGB8P26012 769 aa32.61■■■□□ 2.81
USP42-202ENST00000404008 IQUBQ8NA54 791 aa32.61■■■□□ 2.81
USP42-202ENST00000404008 MCPH1Q8NEM0 835 aa32.61■■■□□ 2.81
USP42-202ENST00000404008 DHX58Q96C10 678 aa32.61■■■□□ 2.81
USP42-202ENST00000404008 GBP4Q96PP9 640 aa32.61■■■□□ 2.81
USP42-202ENST00000404008 MAP7D2Q96T17 732 aa32.61■■■□□ 2.81
USP42-202ENST00000404008 RUSC1Q9BVN2 902 aa32.61■■■□□ 2.81
USP42-202ENST00000404008 NR2E3Q9Y5X4 410 aa32.61■■■□□ 2.81
USP42-202ENST00000404008 RAG1P15918 1043 aa32.6■■■□□ 2.81
USP42-202ENST00000404008 NDUFA8P51970 172 aa32.6■■■□□ 2.81
USP42-202ENST00000404008 ZNF618Q5T7W0 954 aa32.6■■■□□ 2.81
USP42-202ENST00000404008 C1orf186Q6ZWK4 172 aa32.6■■■□□ 2.81
USP42-202ENST00000404008 TCP11Q8WWU5 503 aa32.6■■■□□ 2.81
USP42-202ENST00000404008 TMEM143Q96AN5 459 aa32.6■■■□□ 2.81
USP42-202ENST00000404008 PYM1Q9BRP8 204 aaKnown RBP32.6■■■□□ 2.81
USP42-202ENST00000404008 CUEDC2Q9H467 287 aa32.6■■■□□ 2.81
USP42-202ENST00000404008 AKT3Q9Y243 479 aa32.6■■■□□ 2.81
USP42-202ENST00000404008 SELPP16109 830 aa32.59■■■□□ 2.81
USP42-202ENST00000404008 CYP2C18P33260 490 aa32.59■■■□□ 2.81
USP42-202ENST00000404008 MRPS6P82932 125 aaKnown RBP32.59■■■□□ 2.81
USP42-202ENST00000404008 DHX8Q14562 1220 aaKnown RBP32.59■■■□□ 2.81
USP42-202ENST00000404008 IER5Q5VY09 327 aa32.59■■■□□ 2.81
USP42-202ENST00000404008 TRAF7Q6Q0C0 670 aa32.59■■■□□ 2.81
USP42-202ENST00000404008 WNT8AQ9H1J5 351 aa32.59■■■□□ 2.81
USP42-202ENST00000404008 KCND2Q9NZV8 630 aa32.59■■■□□ 2.81
USP42-202ENST00000404008 SUCLA2Q9P2R7 463 aaPredicted RBP32.59■■■□□ 2.81
USP42-202ENST00000404008 GADD45BO75293 160 aaPredicted RBP32.58■■■□□ 2.81
USP42-202ENST00000404008 VTNP04004 478 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 SYN1P17600 705 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 TMEM62Q0P6H9 643 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 ARSHQ5FYA8 562 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 FAM26DQ5JW98 314 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 LRRC8DQ7L1W4 858 aa32.58■■■□□ 2.81
USP42-202ENST00000404008 ZMYND8Q9ULU4 1186 aaPredicted RBP32.58■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms