RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 XKR3Q5GH77 459 aa14.97□□□□□ -0.01
SDF4-203ENST00000403997 NPAS4Q8IUM7 802 aa14.97□□□□□ -0.01
SDF4-203ENST00000403997 IL27Q8NEV9 243 aa14.97□□□□□ -0.01
SDF4-203ENST00000403997 TMX1Q9H3N1 280 aa14.97□□□□□ -0.01
SDF4-203ENST00000403997 KCNMB3Q9NPA1 279 aa14.97□□□□□ -0.01
SDF4-203ENST00000403997 SEPT9Q9UHD8 586 aaPredicted RBP14.97□□□□□ -0.01
SDF4-203ENST00000403997 LRFN2Q9ULH4 789 aa14.97□□□□□ -0.01
SDF4-203ENST00000403997 DENND3A2RUS2 1198 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 FAM205CA6NFA0 338 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 TBX3O15119 743 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 BAG4O95429 457 aaKnown RBP14.96□□□□□ -0.01
SDF4-203ENST00000403997 CTNNB1P35222 781 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 PSMC5P62195 406 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 PPP2R5CQ13362 524 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 TARBP2Q15633 366 aaKnown RBP14.96□□□□□ -0.01
SDF4-203ENST00000403997 C8orf34Q49A92 452 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 FAM43BQ6ZT52 329 aaPredicted RBP14.96□□□□□ -0.01
SDF4-203ENST00000403997 CCDC83Q8IWF9 413 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 ZNF710Q8N1W2 664 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 LINC01465Q8N7H1 131 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 BANK1Q8NDB2 785 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 ZNF689Q96CS4 500 aaPredicted RBP14.96□□□□□ -0.01
SDF4-203ENST00000403997 ZNF668Q96K58 619 aaPredicted RBP14.96□□□□□ -0.01
SDF4-203ENST00000403997 ADAM2Q99965 735 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 NIFKQ9BYG3 293 aaKnown RBP14.96□□□□□ -0.01
SDF4-203ENST00000403997 PCDHB7Q9Y5E2 793 aa14.96□□□□□ -0.01
SDF4-203ENST00000403997 LOXHD1Q8IVV2 1947 aa14.96□□□□□ -0.02
SDF4-203ENST00000403997 ADGRA3Q8IWK6 1321 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 TMEM150BA6NC51 233 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 BTBD18B2RXH4 712 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 H3BNC9 293 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 MGEA5O60502 916 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 STBD1O95210 358 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 MMP1P03956 469 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 BMPR1AP36894 532 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 SARSP49591 514 aaKnown RBP14.95□□□□□ -0.02
SDF4-203ENST00000403997 TFF2Q03403 129 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 ST3GAL1Q11201 340 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 PTPROQ16827 1216 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 AAK1Q2M2I8 961 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 FAM228AQ86W67 206 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 POTEDQ86YR6 584 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 DIS3L2Q8IYB7 885 aaKnown RBP14.95□□□□□ -0.02
SDF4-203ENST00000403997 SLFN12Q8IYM2 578 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 HAS1Q92839 578 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 TNFRSF25Q93038 417 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 MRPL38Q96DV4 380 aaKnown RBP14.95□□□□□ -0.02
SDF4-203ENST00000403997 SCLT1Q96NL6 688 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 SH2D3AQ9BRG2 576 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 ADAMTS10Q9H324 1103 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 C1orf112Q9NSG2 853 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 VAV3Q9UKW4 847 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 COG5Q9UP83 839 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 RWDD3Q9Y3V2 267 aa14.95□□□□□ -0.02
SDF4-203ENST00000403997 WDR81Q562E7 1941 aa14.94□□□□□ -0.02
SDF4-203ENST00000403997 DKC1O60832 514 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■■■□ 26.5
SDF4-203ENST00000403997 RB1P06400 928 aa14.94□□□□□ -0.02
SDF4-203ENST00000403997 P4HBP07237 508 aaKnown RBP14.94□□□□□ -0.02
SDF4-203ENST00000403997 QARSP47897 775 aaKnown RBP14.94□□□□□ -0.02
SDF4-203ENST00000403997 DNM2P50570 870 aa14.94□□□□□ -0.02
SDF4-203ENST00000403997 GUCY1B3Q02153 619 aa14.94□□□□□ -0.02
SDF4-203ENST00000403997 PAN2Q504Q3 1202 aaKnown RBP14.94□□□□□ -0.02
SDF4-203ENST00000403997 SLC24A5Q71RS6 500 aa14.94□□□□□ -0.02
SDF4-203ENST00000403997 CMTR2Q8IYT2 770 aaKnown RBP14.94□□□□□ -0.02
SDF4-203ENST00000403997 CRIPAKQ8N1N5 446 aa14.94□□□□□ -0.02
SDF4-203ENST00000403997 HLA-CQ95604 372 aa14.94□□□□□ -0.02
SDF4-203ENST00000403997 ZSCAN31Q96LW9 406 aaPredicted RBP14.94□□□□□ -0.02
SDF4-203ENST00000403997 RC3H2Q9HBD1 1191 aaKnown RBP14.94□□□□□ -0.02
SDF4-203ENST00000403997 RGS18Q9NS28 235 aa14.94□□□□□ -0.02
SDF4-203ENST00000403997 RNF216Q9NWF9 866 aaPredicted RBP14.94□□□□□ -0.02
SDF4-203ENST00000403997 TRANK1O15050 2925 aa14.94□□□□□ -0.02
SDF4-203ENST00000403997 VCANP13611 3396 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 C5orf67F2Z3F1 127 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 EIF4BP23588 611 aaKnown RBP14.93□□□□□ -0.02
SDF4-203ENST00000403997 GPC3P51654 580 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 DRP2Q13474 957 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 EPHA7Q15375 998 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 SAFBQ15424 915 aaKnown RBP eCLIP14.93□□□□□ -0.02
SDF4-203ENST00000403997 NCAPH2Q6IBW4 605 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 ANO5Q75V66 913 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 NLRP7Q8WX94 980 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 CLP1Q92989 425 aaKnown RBP14.93□□□□□ -0.02
SDF4-203ENST00000403997 FAM122AQ96E09 287 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 CEP89Q96ST8 783 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 KIF2CQ99661 725 aa14.93□□□□□ -0.02
SDF4-203ENST00000403997 LLPHQ9BRT6 129 aaKnown RBP14.93□□□□□ -0.02
SDF4-203ENST00000403997 C11orf84Q9BUA3 381 aaPredicted RBP14.93□□□□□ -0.02
SDF4-203ENST00000403997 MRPL42Q9Y6G3 142 aaKnown RBP14.93□□□□□ -0.02
SDF4-203ENST00000403997 C9IYK1 514 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 LINC00271P0C7V0 271 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 DARSP14868 501 aaKnown RBP14.92□□□□□ -0.02
SDF4-203ENST00000403997 ZSCAN20P17040 1043 aaPredicted RBP14.92□□□□□ -0.02
SDF4-203ENST00000403997 GATMP50440 423 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 CDC42EP1Q00587 391 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 CALCRLQ16602 461 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 PLA2G4FQ68DD2 849 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 C8orf76Q96K31 380 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 JPH2Q9BR39 696 aaPredicted RBP14.92□□□□□ -0.02
SDF4-203ENST00000403997 CYP26B1Q9NR63 512 aa14.92□□□□□ -0.02
SDF4-203ENST00000403997 SH2B1Q9NRF2 756 aaPredicted RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms