RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 SEZ6LQ9BYH1 1024 aa17.76■□□□□ 0.43
HMGA1-204ENST00000401473 LAMA3Q16787 3333 aa17.76■□□□□ 0.43
HMGA1-204ENST00000401473 MAFO75444 373 aaPredicted RBP17.75■□□□□ 0.43
HMGA1-204ENST00000401473 GNAT1P11488 350 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 CYP2C9P11712 490 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 LIG1P18858 919 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 STAT6P42226 847 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 TBC1D8BQ0IIM8 1120 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 RINT1Q6NUQ1 792 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 EFCAB12Q6NXP0 572 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 PADI6Q6TGC4 694 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 SERINC5Q86VE9 423 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 FMR1NBQ8N0W7 255 aaPredicted RBP17.75■□□□□ 0.43
HMGA1-204ENST00000401473 LRRC71Q8N4P6 559 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 IQUBQ8NA54 791 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 LARP4BQ92615 738 aaKnown RBP17.75■□□□□ 0.43
HMGA1-204ENST00000401473 HTATIP2Q9BUP3 242 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 SUGCTQ9HAC7 445 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 XPNPEP1Q9NQW7 623 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 LOXHD1Q8IVV2 1947 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 ZNF202O95125 648 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 SYKP43405 635 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 UBE2HP62256 183 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 C1orf186Q6ZWK4 172 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 KIAA0319LQ8IZA0 1049 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 METTL13Q8N6R0 699 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 LINC01465Q8N7H1 131 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 DHX38Q92620 1227 aaKnown RBP17.75■□□□□ 0.43
HMGA1-204ENST00000401473 STAMQ92783 540 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 RUSC1Q9BVN2 902 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 STK17AQ9UEE5 414 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 PCDHA2Q9Y5H9 948 aa17.75■□□□□ 0.43
HMGA1-204ENST00000401473 ARHGEF35A5YM69 484 aa17.74■□□□□ 0.43
HMGA1-204ENST00000401473 USO1O60763 962 aaKnown RBP17.74■□□□□ 0.43
HMGA1-204ENST00000401473 NR1I2O75469 434 aa17.74■□□□□ 0.43
HMGA1-204ENST00000401473 SSBP05455 408 aaKnown RBP eCLIP17.74■□□□□ 0.43
HMGA1-204ENST00000401473 MAEAQ7L5Y9 396 aa17.74■□□□□ 0.43
HMGA1-204ENST00000401473 SH3RF1Q7Z6J0 888 aa17.74■□□□□ 0.43
HMGA1-204ENST00000401473 DPF3Q92784 378 aa17.74■□□□□ 0.43
HMGA1-204ENST00000401473 SERTAD1Q9UHV2 236 aa17.74■□□□□ 0.43
HMGA1-204ENST00000401473 MAGEB2O15479 319 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 ACTN4O43707 911 aaKnown RBP17.73■□□□□ 0.43
HMGA1-204ENST00000401473 DGAT1O75907 488 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 CYP11B2P19099 503 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 CLCN3P51790 818 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 POLGP54098 1239 aaPredicted RBP17.73■□□□□ 0.43
HMGA1-204ENST00000401473 DNAJB3Q8WWF6 145 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 SLC7A3Q8WY07 619 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 KBTBD4Q9NVX7 518 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 MROH7Q68CQ1 1323 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 NPHP3-ACAD11A0A0J9YXS1 232 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 DCDC2CA8MYV0 355 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 EVI5O60447 810 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 RAD51AP2Q09MP3 1159 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 C7orf61Q8IZ16 206 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 TMEM143Q96AN5 459 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 GPRC5CQ9NQ84 441 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 NOD1Q9Y239 953 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 PPME1Q9Y570 386 aa17.73■□□□□ 0.43
HMGA1-204ENST00000401473 SMIM35A0A1B0GVV1 85 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 TRIM43BA6NCK2 446 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 MYMKA6NI61 221 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 SLFN14P0C7P3 912 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 MCM4P33991 863 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 RFC5P40937 340 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 FAM160A1Q05DH4 1040 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 PTK7Q13308 1070 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 EMC2Q15006 297 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 TRIM71Q2Q1W2 868 aaKnown RBP17.72■□□□□ 0.43
HMGA1-204ENST00000401473 SV2BQ7L1I2 683 aa17.72■□□□□ 0.43
HMGA1-204ENST00000401473 TRIM43Q96BQ3 446 aaPredicted RBP17.72■□□□□ 0.43
HMGA1-204ENST00000401473 CCDC43Q96MW1 224 aaKnown RBP17.72■□□□□ 0.43
HMGA1-204ENST00000401473 FAM49AQ9H0Q0 323 aaPredicted RBP17.72■□□□□ 0.43
HMGA1-204ENST00000401473 ITGB8P26012 769 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 CASP1P29466 404 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 TAF2Q6P1X5 1199 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 GPBP1Q86WP2 473 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 GRAMD1CQ8IYS0 662 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 DAW1Q8N136 415 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 RETREG2Q8NC44 543 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 TBX21Q9UL17 535 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 MYH11P35749 1972 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.71■□□□□ 0.43
HMGA1-204ENST00000401473 VTNP04004 478 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 CLTBP09497 229 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 CACNB1Q02641 598 aaPredicted RBP17.71■□□□□ 0.43
HMGA1-204ENST00000401473 TMEM62Q0P6H9 643 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 KSR1Q8IVT5 923 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 CUEDC2Q9H467 287 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 ATP6V0A4Q9HBG4 840 aa17.71■□□□□ 0.43
HMGA1-204ENST00000401473 SFI1A8K8P3 1242 aa17.7■□□□□ 0.42
HMGA1-204ENST00000401473 RSPH10B2B2RC85 870 aa17.7■□□□□ 0.42
HMGA1-204ENST00000401473 RSPH10BP0C881 870 aa17.7■□□□□ 0.42
HMGA1-204ENST00000401473 ARL2P36404 184 aa17.7■□□□□ 0.42
HMGA1-204ENST00000401473 AFMP43652 599 aa17.7■□□□□ 0.42
HMGA1-204ENST00000401473 MLLT1Q03111 559 aaPredicted RBP17.7■□□□□ 0.42
HMGA1-204ENST00000401473 MAPK7Q13164 816 aa17.7■□□□□ 0.42
HMGA1-204ENST00000401473 GIT2Q14161 759 aa17.7■□□□□ 0.42
HMGA1-204ENST00000401473 KRBA2Q6ZNG9 492 aa17.7■□□□□ 0.42
HMGA1-204ENST00000401473 DYMQ7RTS9 669 aa17.7■□□□□ 0.42
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