RNA–Protein interactions for RNA: ENST00000399649.5

CACNA1C-219, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-219ENST00000399649 GPT2Q8TD30 523 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 SH3KBP1Q96B97 665 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 IREB2P48200 963 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 PCYT1AP49585 367 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 SKOR1P84550 965 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 TSPY1Q01534 308 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 MRPL28Q13084 256 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 KLHL38Q2WGJ6 581 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 HIBCHQ6NVY1 386 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 CASS4Q9NQ75 786 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 PLAAQ9Y263 795 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 PCDHA5Q9Y5H7 936 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 PLXNC1O60486 1568 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 MAP3K15Q6ZN16 1313 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 GNAT1P11488 350 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 CARSP49589 748 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 PBXIP1Q96AQ6 731 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 WDR62O43379 1518 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 CCDC195A0A1B0GUA6 201 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 KRT72Q14CN4 511 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 EPM2AIP1Q7L775 607 aaPredicted RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 TDRD7Q8NHU6 1098 aaKnown RBP13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 B4GALNT2Q8NHY0 566 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 CYP26B1Q9NR63 512 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 SPTLC3Q9NUV7 552 aa13.15□□□□□ -0.3
CACNA1C-219ENST00000399649 CIAO1O76071 339 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 FAM160B2Q86V87 743 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 EGFL8Q99944 293 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 ELAC2Q9BQ52 826 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 SYTL2Q9HCH5 934 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 KRT38O76015 456 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 ZFXP17010 805 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 AP2B1P63010 937 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 ZBED6P86452 979 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 MAP3K10Q02779 954 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 KHDRBS2Q5VWX1 349 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 TTC13Q8NBP0 860 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 COA7Q96BR5 231 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 WASHC5Q12768 1159 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 PPP6R3Q5H9R7 873 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 RAB42Q8N4Z0 105 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 NGRNQ9NPE2 291 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 MAFGO15525 162 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 MMP1P03956 469 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 ZNF667Q5HYK9 610 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 RRM2BQ7LG56 351 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 TBC1D1Q86TI0 1168 aaPredicted RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 VPS11Q9H270 941 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 KDM4CQ9H3R0 1056 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 HSPA1AP0DMV8 641 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 HSPA1BP0DMV9 641 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 THOC1Q96FV9 657 aaKnown RBP13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 GREM2Q9H772 168 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 ZSCAN32Q9NX65 697 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 SELENONQ9NZV5 590 aa13.14□□□□□ -0.31
CACNA1C-219ENST00000399649 K7ERI5 159 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 MMEP08473 750 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 ANO4Q32M45 955 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 ADA2Q9NZK5 511 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 ARHGAP26Q9UNA1 814 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 PHKA1P46020 1223 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 CTTNQ14247 550 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 UBE2SQ16763 222 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 DCAF4L1Q3SXM0 396 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 TMC4Q7Z404 712 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 FBXO18Q8NFZ0 1043 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 AFG1LQ8WV93 481 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 NRBP1Q9UHY1 535 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 ABT1Q9ULW3 272 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 NUP153P49790 1475 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 USPL1Q5W0Q7 1092 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 CATSPER3Q86XQ3 398 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 GRAMD1CQ8IYS0 662 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 OTULINQ96BN8 352 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 SP110Q9HB58 689 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 AFF4Q9UHB7 1163 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 CFAP69A5D8W1 941 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 NDUFA10O95299 355 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 CCDC159P0C7I6 412 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 CAV1Q03135 178 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 LRRC63Q05C16 580 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 NR1H3Q13133 447 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 PANX2Q96RD6 677 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 SYNGAP1Q96PV0 1343 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 MAST1Q9Y2H9 1570 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 ARIH2O95376 493 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 PLCG1P19174 1290 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 DYNLL1P63167 89 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 MKRN3Q13064 507 aaKnown RBP13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 SSH3Q8TE77 659 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 ACAP3Q96P50 834 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 PNMA3Q9UL41 463 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 MLH3Q9UHC1 1453 aa13.13□□□□□ -0.31
CACNA1C-219ENST00000399649 RASA4BC9J798 803 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms