RNA–Protein interactions for RNA: ENST00000399641.5

CACNA1C-217, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,511 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-217ENST00000399641 HNRNPDLO14979 420 aaKnown RBP11.9□□□□□ -0.51
CACNA1C-217ENST00000399641 BMP3P12645 472 aa11.9□□□□□ -0.51
CACNA1C-217ENST00000399641 CREB3L3Q68CJ9 461 aa11.9□□□□□ -0.51
CACNA1C-217ENST00000399641 SLC25A24Q6NUK1 477 aa11.9□□□□□ -0.51
CACNA1C-217ENST00000399641 PI4KBQ9UBF8 816 aa11.9□□□□□ -0.51
CACNA1C-217ENST00000399641 MAP3K15Q6ZN16 1313 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 EFCAB8A8MWE9 144 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 CYTH3O43739 400 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 ALDH1A1P00352 501 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 IL9RQ01113 521 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 BCAS4Q8TDM0 211 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 CCDC127Q96BQ5 260 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 TYW1Q9NV66 732 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 N6AMT1Q9Y5N5 214 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 GOLGA8KD6RF30 607 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 ST8SIA6P61647 398 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 TTLL4Q14679 1199 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 KRT72Q14CN4 511 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 BMP2KLQ5H9B9 411 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 TMEM154Q6P9G4 183 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 FAM178BQ8IXR5 827 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 RPF1Q9H9Y2 349 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 TUBB4AP04350 444 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 TFAMQ00059 246 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 MESDQ14696 234 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 TXNRD1Q16881 649 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 IYDQ6PHW0 289 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 BRAPQ7Z569 592 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 LUZP2Q86TE4 346 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 SDR42E1Q8WUS8 393 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 MAIP1Q8WWC4 291 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 DEPDC7Q96QD5 511 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 GOLGA8RI6L899 631 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 TRIP4Q15650 581 aaPredicted RBP11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 DDI2Q5TDH0 399 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 PLD3Q8IV08 490 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 KCTD6Q8NC69 237 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 TRIM11Q96F44 468 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 UPF3AQ9H1J1 476 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 KMT5AQ9NQR1 393 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 ADA2Q9NZK5 511 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 PCDHA12Q9UN75 941 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 PCF11O94913 1555 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 SCARA5Q6ZMJ2 495 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 DNAJC5Q9H3Z4 198 aa11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 UTP6Q9NYH9 597 aaKnown RBP11.89□□□□□ -0.51
CACNA1C-217ENST00000399641 ARHGAP10A1A4S6 786 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 HSPA4LO95757 839 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 TTLL1O95922 423 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 FOSP01100 380 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 PPP3CCP48454 512 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 C20orf194Q5TEA3 1177 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 UBE4BO95155 1302 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 GOLGA8IPA6NC78 632 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 NR5A1Q13285 461 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 SNAPC2Q13487 334 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 CYTH1Q15438 398 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 USP17L2Q6R6M4 530 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 ADCK2Q7Z695 626 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 PHKBQ93100 1093 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 ERO1AQ96HE7 468 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 DESI2Q9BSY9 194 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 USP17L5A8MUK1 530 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 PDE1AP54750 535 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 SHROOM1Q2M3G4 852 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 PMM1Q92871 262 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 TRIM45Q9H8W5 580 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 RRAGCQ9HB90 399 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 HOMER3Q9NSC5 361 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 BLMP54132 1417 aaPredicted RBP11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 RARBP10826 455 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 PPM1KQ8N3J5 372 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 TSC1Q92574 1164 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 SNX21Q969T3 373 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 COA1Q9GZY4 146 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 ZFYVE16Q7Z3T8 1539 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 SYCP2Q9BX26 1530 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 A0A1B0GW55 424 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 PEX1O43933 1283 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 APOA1P02647 267 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 CYBBP04839 570 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 DUX4L2P0CJ85 424 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 DUX4L3P0CJ86 424 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 DUX4L4P0CJ87 422 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 DUX4L5P0CJ88 424 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 DUX4L6P0CJ89 424 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 DUX4L7P0CJ90 424 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 KRT24Q2M2I5 525 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 SYDE2Q5VT97 1194 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 PKN3Q6P5Z2 889 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 RIN3Q8TB24 985 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 TESK2Q96S53 571 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 RUBCNLQ9H714 662 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 ZWILCHQ9H900 591 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 KANSL2Q9H9L4 492 aa11.88□□□□□ -0.51
CACNA1C-217ENST00000399641 AAASQ9NRG9 546 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms