RNA–Protein interactions for RNA: ENST00000399338.8

ITSN1-207, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-207ENST00000399338 RCN1Q15293 331 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 GRAMD4Q6IC98 578 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 SLC2A7Q6PXP3 512 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 C4orf50Q6ZRC1 276 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 ZCRB1Q8TBF4 217 aaKnown RBP11.93□□□□□ -0.5
ITSN1-207ENST00000399338 STAMQ92783 540 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 SYMPKQ92797 1274 aaKnown RBP11.93□□□□□ -0.5
ITSN1-207ENST00000399338 HNRNPABQ99729 332 aaKnown RBP11.93□□□□□ -0.5
ITSN1-207ENST00000399338 AIPL1Q9NZN9 384 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 BTBD7Q9P203 1132 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 UBE2Q2LH0YL09 131 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 C6orf118Q5T5N4 469 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 MEX3CQ5U5Q3 659 aaKnown RBP11.93□□□□□ -0.5
ITSN1-207ENST00000399338 GGT6Q6P531 493 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 NEK9Q8TD19 979 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 GAB3Q8WWW8 586 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 ERGIC2Q96RQ1 377 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 KIAA1683Q9H0B3 1180 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 CHPF2Q9P2E5 772 aa11.93□□□□□ -0.5
ITSN1-207ENST00000399338 PACSIN2Q9UNF0 486 aaPredicted RBP11.93□□□□□ -0.5
ITSN1-207ENST00000399338 MAST3O60307 1309 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 PNPLA7Q6ZV29 1317 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 TMEM110-MUSTN1A8MSY1 372 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 HGSO14964 777 aaPredicted RBP11.92□□□□□ -0.5
ITSN1-207ENST00000399338 HALP42357 657 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 TNNI3KQ59H18 835 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 NELFCDQ8IXH7 590 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 ACTRT1Q8TDG2 376 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 TUBGCP2Q9BSJ2 902 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 FOXP1Q9H334 677 aaPredicted RBP11.92□□□□□ -0.5
ITSN1-207ENST00000399338 PABPC3Q9H361 631 aaKnown RBP11.92□□□□□ -0.5
ITSN1-207ENST00000399338 GDAQ9Y2T3 454 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 ZNF711Q9Y462 761 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 FPGT-TNNI3KV9GXZ4 949 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 UTYO14607 1347 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 RIMBP3CA6NJZ7 1639 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 RIMBP3BA6NNM3 1639 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 RIMBP3Q9UFD9 1639 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 SMIM31A0A1B0GVY4 71 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 MAP3K7O43318 606 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 SERPINB7O75635 380 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 SLC1A4P43007 532 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 CLCN2P51788 898 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 NEK3P51956 506 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 PDE1BQ01064 536 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 EHHADHQ08426 723 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 ITGA9Q13797 1035 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 CYLC2Q14093 348 aaPredicted RBP11.92□□□□□ -0.5
ITSN1-207ENST00000399338 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.92□□□□□ -0.5
ITSN1-207ENST00000399338 ZCWPW2Q504Y3 356 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 DIS3L2Q8IYB7 885 aaKnown RBP11.92□□□□□ -0.5
ITSN1-207ENST00000399338 ADSSL1Q8N142 457 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 NAP1L3Q99457 506 aaPredicted RBP11.92□□□□□ -0.5
ITSN1-207ENST00000399338 TMEM109Q9BVC6 243 aa11.92□□□□□ -0.5
ITSN1-207ENST00000399338 ANGEL1Q9UNK9 670 aaKnown RBP11.92□□□□□ -0.5
ITSN1-207ENST00000399338 TLDC2A0PJX2 215 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 RBAK-RBAKDNI3L0D1 243 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 TBX10O75333 385 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 PIM1P11309 404 aaPredicted RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 XBP1P17861 261 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 HOXD11P31277 338 aaPredicted RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 RGS2P41220 211 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 SERPINB8P50452 374 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 LRRC14Q15048 493 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 PPFIBP2Q8ND30 876 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 CKAP2Q8WWK9 683 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 NMD3Q96D46 503 aaKnown RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 CLIP3Q96DZ5 547 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 TCHPQ9BT92 498 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 METTL14Q9HCE5 456 aaKnown RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 METTL5Q9NRN9 209 aaKnown RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 MYPNQ86TC9 1320 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 CAPN9O14815 690 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 FOXP2O15409 715 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 GNAT2P19087 354 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 MARK3P27448 753 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 GRIA2P42262 883 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 GFPT1Q06210 699 aaPredicted RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 MKRN3Q13064 507 aaKnown RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 NAB2Q15742 525 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 RFWD3Q6PCD5 774 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 UNC13DQ70J99 1090 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 HS2ST1Q7LGA3 356 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 TMC4Q7Z404 712 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 VSIG1Q86XK7 387 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 ST13P4Q8IZP2 240 aaPredicted RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 FNDC8Q8TC99 324 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 FMO2Q99518 471 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 ZMYND12Q9H0C1 365 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 DDX47Q9H0S4 455 aaKnown RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 TIMMDC1Q9NPL8 285 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 DISP2A7MBM2 1401 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 STRNO43815 780 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
ITSN1-207ENST00000399338 KRT36O76013 467 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 NEK2P51955 445 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 MIIPQ5JXC2 388 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 PDXDC2PQ6P474 469 aa11.91□□□□□ -0.5
ITSN1-207ENST00000399338 TREML1Q86YW5 311 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms