RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 AMFRQ9UKV5 643 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 PCDHA12Q9UN75 941 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 HOXA7P31268 230 aaPredicted RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 IFNAR2P48551 515 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 PLTPP55058 493 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 IFI35P80217 286 aaPredicted RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 DR1Q01658 176 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 ZNF211Q13398 564 aaPredicted RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 RC3H1Q5TC82 1133 aaKnown RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 SYCE1Q8N0S2 351 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 ATXN2LQ8WWM7 1075 aaKnown RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 PRMT1Q99873 361 aaKnown RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 TXLNGYQ9BZA5 131 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 ERVK-5Q9HDB9 667 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 GGT7Q9UJ14 662 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 NEBLO76041 1014 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 GFPT2O94808 682 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 VIMP08670 466 aaKnown RBP15.19■□□□□ 0.02
APOB-202ENST00000399256 PMS2P54278 862 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 GALCP54803 685 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 NBPF9Q3BBW0 867 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 DCAF12L1Q5VU92 463 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 CENPTQ96BT3 561 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 RAB17Q9H0T7 212 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 ADAM7Q9H2U9 754 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 GPCPD1Q9NPB8 672 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 SNX24Q9Y343 169 aa15.19■□□□□ 0.02
APOB-202ENST00000399256 A0A1B0GUA9 196 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 BAG3O95817 575 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 CYP11B2P19099 503 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 ABCB4P21439 1286 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 EIF6P56537 245 aaKnown RBP15.18■□□□□ 0.02
APOB-202ENST00000399256 MYO1EQ12965 1108 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 CRYMQ14894 314 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 DENND2CQ68D51 928 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 TAX1BP1Q86VP1 789 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 NEDD1Q8NHV4 660 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 RNF25Q96BH1 459 aaPredicted RBP15.18■□□□□ 0.02
APOB-202ENST00000399256 RIOX1Q9H6W3 641 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 PPP1R9AQ9ULJ8 1098 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 SLC12A4Q9UP95 1085 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 MAST2Q6P0Q8 1798 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 VPS36Q86VN1 386 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 LRRC47Q8N1G4 583 aaKnown RBP15.18■□□□□ 0.02
APOB-202ENST00000399256 NEK9Q8TD19 979 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 THOC1Q96FV9 657 aaKnown RBP15.18■□□□□ 0.02
APOB-202ENST00000399256 ZDHHC18Q9NUE0 388 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 SAMD15Q9P1V8 674 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 NENFQ9UMX5 172 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 L3MBTL1Q9Y468 752 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 DAAM1Q9Y4D1 1078 aa15.18■□□□□ 0.02
APOB-202ENST00000399256 XRCC5P13010 732 aaKnown RBP15.17■□□□□ 0.02
APOB-202ENST00000399256 STAT3P40763 770 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 PRKCIP41743 596 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 SLCO1A2P46721 670 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 EDRF1Q3B7T1 1238 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 ZC3H3Q8IXZ2 948 aaKnown RBP15.17■□□□□ 0.02
APOB-202ENST00000399256 FAXDC2Q96IV6 333 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 CCDC113Q9H0I3 377 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 SLC24A3Q9HC58 644 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 ABCF3Q9NUQ8 709 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 INTS9Q9NV88 658 aaKnown RBP15.17■□□□□ 0.02
APOB-202ENST00000399256 RGS16O15492 202 aaPredicted RBP15.17■□□□□ 0.02
APOB-202ENST00000399256 MMP13P45452 471 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 NT5C2P49902 561 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 PIGWQ7Z7B1 504 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 LNX1Q8TBB1 728 aaPredicted RBP15.17■□□□□ 0.02
APOB-202ENST00000399256 ERP44Q9BS26 406 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 NT5C3AQ9H0P0 336 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 ZNF287Q9HBT7 754 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 GCNT4Q9P109 453 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 AGAP1Q9UPQ3 857 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 CD2APQ9Y5K6 639 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 IGSF9BQ9UPX0 1349 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 ASAP2O43150 1006 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 SKAP2O75563 359 aaPredicted RBP15.17■□□□□ 0.02
APOB-202ENST00000399256 PTENP60484 403 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 SLC29A2Q14542 456 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 PPP2R5AQ15172 486 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 EPHA7Q15375 998 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 ARSHQ5FYA8 562 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 DUPD1Q68J44 220 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 POTEAQ6S8J7 498 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 C16orf86Q6ZW13 317 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 CLEC10AQ8IUN9 316 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 SLC35G2Q8TBE7 412 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 FBXO25Q8TCJ0 367 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 NSMCE1Q8WV22 266 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 ANKRD2Q9GZV1 360 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 PABPC3Q9H361 631 aaKnown RBP15.17■□□□□ 0.02
APOB-202ENST00000399256 SIX2Q9NPC8 291 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 LRRC4BQ9NT99 713 aa15.17■□□□□ 0.02
APOB-202ENST00000399256 KDM3AQ9Y4C1 1321 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 A0A0A6YYK5 440 aaPredicted RBP15.16■□□□□ 0.02
APOB-202ENST00000399256 POTEFA5A3E0 1075 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 DDX3YO15523 660 aaKnown RBP15.16■□□□□ 0.02
APOB-202ENST00000399256 AKAP3O75969 853 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 POTEIP0CG38 1075 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 KRT13P13646 458 aa15.16■□□□□ 0.02
APOB-202ENST00000399256 KLRC3Q07444 240 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms