RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 C4orf32Q8N8J7 132 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 HSD17B14Q9BPX1 270 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 AKT3Q9Y243 479 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 PCDHA11Q9Y5I1 949 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 KDM3AQ9Y4C1 1321 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 GBF1Q92538 1859 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 PTPRSQ13332 1948 aa15.79■□□□□ 0.12
HLA-DQB1-202ENST00000399079 A0A087WWV3 80 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 GPR32O75388 356 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CA3P07451 260 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 YWHABP31946 246 aaKnown RBP15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 NLRP11P59045 1033 aaKnown RBP15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ORC2Q13416 577 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 GRIN2CQ14957 1233 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 C4orf19Q8IY42 314 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 APBB2Q92870 758 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 OSMRQ99650 979 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ZBED2Q9BTP6 218 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ZSWIM4Q9H7M6 989 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 SLC28A3Q9HAS3 691 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CYP26B1Q9NR63 512 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 PADI3Q9ULW8 664 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TLL1O43897 1013 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 DKC1O60832 514 aaKnown RBP eCLIP15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 ARHGEF15O94989 841 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 GJB5O95377 273 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TMOD1P28289 359 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 PTGDRQ13258 359 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 CEP170P1Q96L14 293 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 MAP7D2Q96T17 732 aa15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 BMP2KQ9NSY1 1161 aaPredicted RBP15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 NOC2LQ9Y3T9 749 aaKnown RBP15.78■□□□□ 0.12
HLA-DQB1-202ENST00000399079 TMEM265A0A087WTH1 108 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 IGKV6-21A0A0C4DH24 114 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 LCHNA4D1U4 455 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 MAFO75444 373 aaPredicted RBP15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 UPP2O95045 317 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 AMHP03971 560 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 NFX1Q12986 1120 aaKnown RBP15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PAK2Q13177 524 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PPP2R2DQ66LE6 453 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 SPRED2Q7Z698 418 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 USP38Q8NB14 1042 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 CDX2Q99626 313 aaPredicted RBP15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ADAMTS10Q9H324 1103 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 SQORQ9Y6N5 450 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 MICAL3Q7RTP6 2002 aa15.77■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PRUNE2Q8WUY3 3088 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 LOXHD1Q8IVV2 1947 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 VPS37CA5D8V6 355 aaPredicted RBP15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ENPP3O14638 875 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 RPS6KA5O75582 802 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 SPATA31C1P0DKV0 1188 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 CRYBB1P53674 252 aaPredicted RBP15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 RILPL1Q5EBL4 403 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 XKR9Q5GH70 373 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 RTN4RL1Q86UN2 441 aaPredicted RBP15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 FERMT3Q86UX7 667 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 CATSPER3Q86XQ3 398 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PIGOQ8TEQ8 1089 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 LINC01599Q8WXQ3 324 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 TOP1MTQ969P6 601 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 SNX21Q969T3 373 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 INTS4Q96HW7 963 aaKnown RBP15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 TMX1Q9H3N1 280 aa15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.76■□□□□ 0.11
HLA-DQB1-202ENST00000399079 MED24O75448 989 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 CSDE1O75534 798 aaKnown RBP15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 GPC3P51654 580 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 OTUD6AQ7L8S5 288 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 KSR1Q8IVT5 923 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 NEK9Q8TD19 979 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 MYLIPQ8WY64 445 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 RAD9AQ99638 391 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PRDM12Q9H4Q4 367 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 DHX33Q9H6R0 707 aaKnown RBP15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 CERS4Q9HA82 394 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ST3GAL5Q9UNP4 418 aa15.75■□□□□ 0.11
HLA-DQB1-202ENST00000399079 LYPLA2O95372 231 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 SYT1P21579 422 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 DNM2P50570 870 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 POLGP54098 1239 aaPredicted RBP15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 IL17AQ16552 155 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 FAM228AQ86W67 206 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 RHPN2Q8IUC4 686 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 SLC7A3Q8WY07 619 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 TMEM143Q96AN5 459 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 SCLT1Q96NL6 688 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 ERVK-5Q9HDB9 667 aa15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 SUCLA2Q9P2R7 463 aaPredicted RBP15.74■□□□□ 0.11
HLA-DQB1-202ENST00000399079 MGEA5O60502 916 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 PDCP20941 246 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 EIF4BP23588 611 aaKnown RBP15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 TAP1Q03518 808 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 POTEGQ6S5H5 508 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 NLRP7Q8WX94 980 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 FTHL17Q9BXU8 183 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 LRWD1Q9UFC0 647 aa15.73■□□□□ 0.11
HLA-DQB1-202ENST00000399079 MYO9BQ13459 2157 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms