RNA–Protein interactions for RNA: ENST00000398788.4

CDH23-203, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-203ENST00000398788 MAGEC3Q8TD91 643 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 FAM153AQ9UHL3 310 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 SPATA31A6Q5VVP1 1343 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 MED14O60244 1454 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 FAM196BA6NMK8 535 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 HNRNPRO43390 633 aaKnown RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 GSTT1P30711 240 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 MCAMP43121 646 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 DNM2P50570 870 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 ST13P4Q8IZP2 240 aaPredicted RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 ANKRD35Q8N283 1001 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 TBCKQ8TEA7 893 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 RAB17Q9H0T7 212 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 TXLNGQ9NUQ3 528 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 LSM1O15116 133 aaKnown RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 BCRP11274 1271 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 NPR1P16066 1061 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 XRCC4Q13426 336 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 COL9A3Q14050 684 aaPredicted RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 ABCB5Q2M3G0 1257 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 ODR4Q5SWX8 454 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 GALNT17Q6IS24 598 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 CASC4Q6P4E1 433 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 CRELD2Q6UXH1 353 aaPredicted RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 LRRC34Q8IZ02 419 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 UBL4BQ8N7F7 174 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 PRPF31Q8WWY3 499 aaKnown RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 TUBGCP2Q9BSJ2 902 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 PIDD1Q9HB75 910 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 EXOC7Q9UPT5 735 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 A8MUI8 341 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 PDE2AO00408 941 aaPredicted RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 SEMA3EO15041 775 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 CLIC2O15247 247 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 DNAJC6O75061 913 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 ETS2P15036 469 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 ADRA2BP18089 450 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 VPS72Q15906 364 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 FAM47CQ5HY64 1035 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 ARHGEF16Q5VV41 709 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 EEPD1Q7L9B9 569 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 PHLDB2Q86SQ0 1253 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 DDX42Q86XP3 938 aaKnown RBP eCLIP10.03□□□□□ -0.8
CDH23-203ENST00000398788 CFAP61Q8NHU2 1237 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 DDX12PQ92771 950 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 DCPSQ96C86 337 aaKnown RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 ZNF570Q96NI8 536 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 SERPINB13Q9UIV8 391 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 TUBE1Q9UJT0 475 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 PACSIN2Q9UNF0 486 aaPredicted RBP10.03□□□□□ -0.8
CDH23-203ENST00000398788 PTPRUQ92729 1446 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 MROH7-TTC4A0A0A0MT08 1334 aa10.03□□□□□ -0.8
CDH23-203ENST00000398788 LRRIQ4A6NIV6 560 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 H7C1W4 665 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 K7ENM7 598 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 GTPBP6O43824 516 aaPredicted RBP10.02□□□□□ -0.8
CDH23-203ENST00000398788 CYP2D6P10635 497 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 KRT15P19012 456 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 CACNA2D1P54289 1103 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 GEN1Q17RS7 908 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 DALRD3Q5D0E6 543 aaKnown RBP10.02□□□□□ -0.8
CDH23-203ENST00000398788 LIN9Q5TKA1 542 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 CCDC80Q76M96 950 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 TMEM110Q86TL2 294 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 DEPTORQ8TB45 409 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 ARHGEF1Q92888 912 aaKnown RBP10.02□□□□□ -0.8
CDH23-203ENST00000398788 NAP1L3Q99457 506 aaPredicted RBP10.02□□□□□ -0.8
CDH23-203ENST00000398788 ANO3Q9BYT9 981 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 PREBQ9HCU5 417 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 DAAM1Q9Y4D1 1078 aa10.02□□□□□ -0.8
CDH23-203ENST00000398788 MED23Q9ULK4 1368 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 ZNF233A6NK53 670 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 MRPS9P82933 396 aaKnown RBP10.02□□□□□ -0.81
CDH23-203ENST00000398788 SLC5A9Q2M3M2 681 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 ELOA2Q8IYF1 753 aaPredicted RBP10.02□□□□□ -0.81
CDH23-203ENST00000398788 PDCD7Q8N8D1 485 aaKnown RBP10.02□□□□□ -0.81
CDH23-203ENST00000398788 SLC44A5Q8NCS7 719 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 ZNF653Q96CK0 615 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 PLEKHG4BQ96PX9 1271 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 UNC45AQ9H3U1 944 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 TSKSQ9UJT2 592 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 MGRN1O60291 552 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 DKC1O60832 514 aaKnown RBP eCLIP10.02□□□□□ -0.81
CDH23-203ENST00000398788 ZBTB7AO95365 584 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 CYP19A1P11511 503 aaPredicted RBP10.02□□□□□ -0.81
CDH23-203ENST00000398788 GRAPQ13588 217 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 SCYL2Q6P3W7 929 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 GRAPLQ8TC17 118 aaPredicted RBP10.02□□□□□ -0.81
CDH23-203ENST00000398788 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.02□□□□□ -0.81
CDH23-203ENST00000398788 NR1H4Q96RI1 486 aaPredicted RBP10.02□□□□□ -0.81
CDH23-203ENST00000398788 CCPG1Q9ULG6 757 aa10.02□□□□□ -0.81
CDH23-203ENST00000398788 LRRN2O75325 713 aa10.01□□□□□ -0.81
CDH23-203ENST00000398788 PLEKHA8P1O95397 391 aa10.01□□□□□ -0.81
CDH23-203ENST00000398788 POLR2MP0CAP2 368 aa10.01□□□□□ -0.81
CDH23-203ENST00000398788 TBX2Q13207 712 aaPredicted RBP10.01□□□□□ -0.81
CDH23-203ENST00000398788 UBE2SQ16763 222 aa10.01□□□□□ -0.81
CDH23-203ENST00000398788 SLC27A3Q5K4L6 730 aa10.01□□□□□ -0.81
CDH23-203ENST00000398788 CTAGE3PQ8IX95 158 aa10.01□□□□□ -0.81
CDH23-203ENST00000398788 NMD3Q96D46 503 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms