RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 B4E1Z4 1266 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 H0Y858 1186 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 PPM1GO15355 546 aaPredicted RBP3.9□□□□□ -1.79
CD47-203ENST00000398258 PDE8AO60658 829 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 MSCO60682 206 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 CKMP06732 381 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 KCNA6P17658 529 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 SOX5P35711 763 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 RAC3P60763 192 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 SLC25A3Q00325 362 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 GRIN1Q05586 938 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 FSTL1Q12841 308 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 USP10Q14694 798 aaKnown RBP3.9□□□□□ -1.79
CD47-203ENST00000398258 C21orf62-AS1Q17RA5 79 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 COLEC12Q5KU26 742 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 LBX2Q6XYB7 198 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 FGD2Q7Z6J4 655 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 KIF18BQ86Y91 864 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 IFNL3Q8IZI9 196 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 AFAP1L2Q8N4X5 818 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 CFHR4Q92496 578 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 TMEM169Q96HH4 297 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 MAGEB10Q96LZ2 347 aaPredicted RBP3.9□□□□□ -1.79
CD47-203ENST00000398258 MTFR1LQ9H019 292 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 TLR9Q9NR96 1032 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 CLDND1Q9NY35 253 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 MYOTQ9UBF9 498 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 PPARGC1AQ9UBK2 798 aaKnown RBP3.9□□□□□ -1.79
CD47-203ENST00000398258 NDOR1Q9UHB4 597 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 TRAF6Q9Y4K3 522 aa3.9□□□□□ -1.79
CD47-203ENST00000398258 EYA4O95677 639 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 CRTAMO95727 393 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 ITGB6P18564 788 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 IGFALSP35858 605 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 MRPS21P82921 87 aaKnown RBP3.89□□□□□ -1.79
CD47-203ENST00000398258 LSAMPQ13449 338 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 DHCR24Q15392 516 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 SKIDA1Q1XH10 827 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 SPTY2D1Q68D10 685 aaPredicted RBP3.89□□□□□ -1.79
CD47-203ENST00000398258 REXO1L1PQ8IX06 675 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 IFNL2Q8IZJ0 200 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 AHI1Q8N157 1196 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 ZNF764Q96H86 408 aaPredicted RBP3.89□□□□□ -1.79
CD47-203ENST00000398258 GPRC5BQ9NZH0 403 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 ASH2LQ9UBL3 628 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 ATP8A1Q9Y2Q0 1164 aa3.89□□□□□ -1.79
CD47-203ENST00000398258 COA3Q9Y2R0 106 aaPredicted RBP3.89□□□□□ -1.79
CD47-203ENST00000398258 TNPO3Q9Y5L0 923 aaKnown RBP3.89□□□□□ -1.79
CD47-203ENST00000398258 CDC14BO60729 498 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 RASGRP1O95267 797 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 HIBADHP31937 336 aaKnown RBP3.88□□□□□ -1.79
CD47-203ENST00000398258 GTF2A2P52657 109 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 ANAPC15P60006 121 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 KIZQ2M2Z5 673 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 ZKSCAN2Q63HK3 967 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 VASNQ6EMK4 673 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 ZCCHC8Q6NZY4 707 aaKnown RBP3.88□□□□□ -1.79
CD47-203ENST00000398258 ABHD17CQ6PCB6 329 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 PCDH19Q8TAB3 1148 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 STAG1Q8WVM7 1258 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 FAM89AQ96GI7 184 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 PRRX2Q99811 253 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 JAM3Q9BX67 310 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 REXO2Q9Y3B8 237 aaKnown RBP3.88□□□□□ -1.79
CD47-203ENST00000398258 TELO2Q9Y4R8 837 aa3.88□□□□□ -1.79
CD47-203ENST00000398258 H7BY64 318 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 SLC27A2O14975 620 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 LTFP02788 710 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 CHGBP05060 677 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 MSX2P35548 267 aaPredicted RBP3.87□□□□□ -1.79
CD47-203ENST00000398258 FLT3P36888 993 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 MECP2P51608 486 aaKnown RBP3.87□□□□□ -1.79
CD47-203ENST00000398258 RRADP55042 308 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 GUCY1A3Q02108 690 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 PAK1Q13153 545 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 ZNF460Q14592 562 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 HABP4Q5JVS0 413 aaKnown RBP3.87□□□□□ -1.79
CD47-203ENST00000398258 LCE1AQ5T7P2 110 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 KCNJ15Q99712 375 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 TACO1Q9BSH4 297 aaKnown RBP3.87□□□□□ -1.79
CD47-203ENST00000398258 FAM126AQ9BYI3 521 aaPredicted RBP3.87□□□□□ -1.79
CD47-203ENST00000398258 CELF4Q9BZC1 486 aaKnown RBP3.87□□□□□ -1.79
CD47-203ENST00000398258 DDX56Q9NY93 547 aaKnown RBP3.87□□□□□ -1.79
CD47-203ENST00000398258 PCDHA9Q9Y5H5 950 aa3.87□□□□□ -1.79
CD47-203ENST00000398258 CBX4O00257 560 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 OPA1O60313 960 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 DGKIO75912 1065 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 ERBB2P04626 1255 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 JMJD7P0C870 316 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 COL6A2P12110 1019 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 ZNF37AP17032 561 aaPredicted RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 BPIP17213 487 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 CDK11BP21127 795 aaKnown RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 GRK2P25098 689 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 GRK3P35626 688 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 C21orf58P58505 322 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 PFKPQ01813 784 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 TOP3AQ13472 1001 aaPredicted RBP3.86□□□□□ -1.79
CD47-203ENST00000398258 PCOLCEQ15113 449 aa3.86□□□□□ -1.79
CD47-203ENST00000398258 PCBP1Q15365 356 aaKnown RBP eCLIP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms