RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 BLOC1S4Q9NUP1 217 aa12.02□□□□□ -0.49
CSGALNACT1-202ENST00000397998 NOP53Q9NZM5 478 aaKnown RBP12.02□□□□□ -0.49
CSGALNACT1-202ENST00000397998 EVI5O60447 810 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ATF2P15336 505 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 AGBL2Q5U5Z8 902 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ZNF662Q6ZS27 426 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 C4orf32Q8N8J7 132 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 KCNV2Q8TDN2 545 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SHISA4Q96DD7 197 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SLC4A9Q96Q91 983 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 AMNQ9BXJ7 453 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CHORDC1Q9UHD1 332 aaPredicted RBP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ATRNO75882 1429 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 AKR1B1P15121 316 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ORC2Q13416 577 aaPredicted RBP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ZNF571Q7Z3V5 609 aaPredicted RBP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 KCNK18Q7Z418 384 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CNPY4Q8N129 248 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TPCN2Q8NHX9 752 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SYN2Q92777 582 aaPredicted RBP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CALR3Q96L12 384 aaKnown RBP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SH3GL2Q99962 352 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 FAM196BA6NMK8 535 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ZBTB5O15062 677 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 PJA2O43164 708 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CAND2O75155 1236 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 HSPA9P38646 679 aaKnown RBP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SCTRP47872 440 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 FXR2P51116 673 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SLC29A2Q14542 456 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 KIAA1755Q5JYT7 1200 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 IQCKQ8N0W5 287 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TAB3Q8N5C8 712 aaPredicted RBP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 PNMA5Q96PV4 448 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 FAM167BQ9BTA0 163 aa12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TYW1Q9NV66 732 aaKnown RBP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CCT8L1PA6NM43 557 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 KCNQ2O43526 872 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SHOX2O60902 331 aaPredicted RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 HOXA7P31268 230 aaPredicted RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ZNF844Q08AG5 666 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SF3B3Q15393 1217 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 DOK7Q18PE1 504 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TSNAXIP1Q2TAA8 658 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CCDC137Q6PK04 289 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 PARVGQ9HBI0 331 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 MST1RQ04912 1400 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 MRC1P22897 1456 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 LRRC37A3O60309 1634 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 PODXLO00592 558 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 FTLP02792 175 aaPredicted RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 MYBP10242 640 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 HSPA6P17066 643 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TAF11Q15544 211 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CERKLQ49MI3 558 aaPredicted RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ZNF449Q6P9G9 518 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 C3orf67Q6ZVT6 689 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 FRMD5Q7Z6J6 570 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SRRM1Q8IYB3 904 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 BAP1Q92560 729 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 P3H4Q92791 437 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 MCUR1Q96AQ8 359 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 RBM17Q96I25 401 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 FSBPO95073 299 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ARHGAP4P98171 946 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ICA1Q05084 483 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TRAF1Q13077 416 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ITPK1Q13572 414 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TMED2Q15363 201 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 C6orf163Q5TEZ5 329 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 MEX3CQ5U5Q3 659 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 KIF2BQ8N4N8 673 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 PPFIBP2Q8ND30 876 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 STMN2Q93045 179 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 RAB3IPQ96QF0 476 aaPredicted RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TTYH3Q9C0H2 523 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 LARSQ9P2J5 1176 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 STK24Q9Y6E0 443 aa12□□□□□ -0.49
CSGALNACT1-202ENST00000397998 TCP11X1B4DZS4 312 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 CLGNO14967 610 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 NMT1P30419 496 aaKnown RBP11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 KCNJ1P48048 391 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 KCNMA1Q12791 1236 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 FYB2Q5VWT5 728 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 RHOT2Q8IXI1 618 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 LRRC34Q8IZ02 419 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ECT2Q9H8V3 914 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 OSGEPQ9NPF4 335 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 RGL1Q9NZL6 768 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 LTN1O94822 1766 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 ABCB11O95342 1321 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SYNGAP1Q96PV0 1343 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 H0Y3Z8 333 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 DLATP10515 647 aaKnown RBP11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 GAP43P17677 238 aa11.99□□□□□ -0.49
CSGALNACT1-202ENST00000397998 SOX5P35711 763 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms