RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 SAR1BQ9Y6B6 198 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 PSAPP07602 524 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 ZBTB48P10074 688 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CD44P16070 742 aaKnown RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CASP14P31944 242 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 YWHAEP62258 255 aaKnown RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 RPS6P62753 249 aaKnown RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 LRMPQ12912 555 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 MAPK7Q13164 816 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 MXD4Q14582 209 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CACNA2D4Q7Z3S7 1137 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 AVENQ9NQS1 362 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 UVRAGQ9P2Y5 699 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 GOLGA8HP0CJ92 632 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 MAN1A1P33908 653 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 FXR1P51114 621 aaKnown RBP eCLIP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 MIIPQ5JXC2 388 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 KLHL10Q6JEL2 608 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 ZNF577Q9BSK1 485 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 DHX33Q9H6R0 707 aaKnown RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CTAGE15A4D2H0 777 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CTAGE8P0CG41 777 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 PLS3P13797 630 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 EXOC3L4Q17RC7 722 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 ANKRD40Q6AI12 368 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 RNF207Q6ZRF8 634 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CTAGE6Q86UF2 777 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CTAGE4Q8IX94 777 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 MMGT1Q8N4V1 131 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 MAIP1Q8WWC4 291 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 TCP11Q8WWU5 503 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 PBKQ96KB5 322 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 MOV10L1Q9BXT6 1211 aaKnown RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 ZNF518BQ9C0D4 1074 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 VTA1Q9NP79 307 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 POTEMA6NI47 508 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 H2AFZP0C0S5 128 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 HOXD8P13378 290 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 MTMR1Q13613 665 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 H2AFVQ71UI9 128 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 TRAPPC11Q7Z392 1133 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CLEC4DQ8WXI8 215 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 SLC7A3Q8WY07 619 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 BORCS6Q96GS4 357 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 IFIH1Q9BYX4 1025 aaKnown RBP6.41□□□□□ -1.38
PTPRD-206ENST00000397617 PPCSQ9HAB8 311 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 CNTN6Q9UQ52 1028 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 SFMBT2Q5VUG0 894 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 C11orf63Q6NUN7 778 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 PDXDC1Q6P996 788 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 VRTNQ9H8Y1 702 aa6.41□□□□□ -1.38
PTPRD-206ENST00000397617 TBXAS1P24557 533 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-206ENST00000397617 GMPSP49915 693 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-206ENST00000397617 STXBP2Q15833 593 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 MICALL2Q8IY33 904 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 SPC24Q8NBT2 197 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 PDLIM7Q9NR12 457 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 CCND2P30279 289 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 NAMPTP43490 491 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 METTL7BQ6UX53 244 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 MIER3Q7Z3K6 550 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 SHC3Q92529 594 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 IFT74Q96LB3 600 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 GTF3C4Q9UKN8 822 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 UQCRHLA0A096LP55 91 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 WNT7AO00755 349 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 UQCRHP07919 91 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 EPS15P42566 896 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 MCM6Q14566 821 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 FAM186BQ8IYM0 893 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 HPS3Q969F9 1004 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 FIZ1Q96SL8 496 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 JPH1Q9HDC5 661 aaPredicted RBP6.4□□□□□ -1.38
PTPRD-206ENST00000397617 NRBP2Q9NSY0 501 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 ZHX2Q9Y6X8 837 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 CITO14578 2027 aa6.4□□□□□ -1.38
PTPRD-206ENST00000397617 RAD17O75943 681 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 ARHGAP25P42331 645 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 MAGEA1P43355 309 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 NCKAP1LP55160 1127 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 PTP4A2Q12974 167 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 NAB2Q15742 525 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 ODR4Q5SWX8 454 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 TTBK2Q6IQ55 1244 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 SLFN11Q7Z7L1 901 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 CMTR1Q8N1G2 835 aaKnown RBP6.4□□□□□ -1.39
PTPRD-206ENST00000397617 RASGRP4Q8TDF6 673 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 AGPAT3Q9NRZ7 376 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 ZNF215Q9UL58 517 aaPredicted RBP6.4□□□□□ -1.39
PTPRD-206ENST00000397617 KIAA1257Q9ULG3 409 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 NENFQ9UMX5 172 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 HYOU1Q9Y4L1 999 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 UBE2Q2LH0YL09 131 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 CFBP00751 764 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 CBLBQ13191 982 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 ARSHQ5FYA8 562 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 FAM160B1Q5W0V3 765 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 PADI6Q6TGC4 694 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 MREGQ8N565 214 aa6.4□□□□□ -1.39
PTPRD-206ENST00000397617 LXNQ9BS40 222 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms