RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 MTHFD1LQ6UB35 978 aa26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 ZBTB10Q96DT7 871 aa26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 PAGE5Q96GU1 130 aa26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 TIGD1Q96MW7 591 aa26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 SEZ6LQ9BYH1 1024 aa26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 TRIP12Q14669 1992 aaPredicted RBP26.24■■□□□ 1.79
TSPAN4-203ENST00000397397 MAGEB2O15479 319 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 MAFO75444 373 aaPredicted RBP26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 C22orf31O95567 290 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 CYP11B2P19099 503 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 HOXC8P31273 242 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 ATN1P54259 1190 aaPredicted RBP26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 AMPD3Q01432 767 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 MARCH8Q5T0T0 291 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 SLC39A5Q6ZMH5 540 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 C1orf186Q6ZWK4 172 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 EXOC8Q8IYI6 725 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 GRAMD1CQ8IYS0 662 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 SLC7A3Q8WY07 619 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 CCDC34Q96HJ3 373 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 LRRC27Q9C0I9 530 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 DHX33Q9H6R0 707 aaKnown RBP26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 ATP6V0A4Q9HBG4 840 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 TUBE1Q9UJT0 475 aa26.23■■□□□ 1.79
TSPAN4-203ENST00000397397 MYMKA6NI61 221 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 KRT18P05783 430 aaKnown RBP26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 ADAM17P78536 824 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 EMC2Q15006 297 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 ARSHQ5FYA8 562 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 KANK3Q6NY19 840 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 MTRQ99707 1265 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 JPH2Q9BR39 696 aaPredicted RBP26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 TREHO43280 583 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 CDK7P50613 346 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 MAEAQ7L5Y9 396 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 UBE2Q1Q7Z7E8 422 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 METTL13Q8N6R0 699 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 RETREG2Q8NC44 543 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 SUGCTQ9HAC7 445 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 PDLIM7Q9NR12 457 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 KCND2Q9NZV8 630 aa26.22■■□□□ 1.79
TSPAN4-203ENST00000397397 EVPLQ92817 2033 aa26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 NPHP3-ACAD11A0A0J9YXS1 232 aa26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 MBLAC1A4D2B0 266 aaPredicted RBP26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 RAD51AP2Q09MP3 1159 aa26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 PTGISQ16647 500 aa26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 EFCAB12Q6NXP0 572 aa26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 DYMQ7RTS9 669 aa26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 SH3RF1Q7Z6J0 888 aa26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 MCPH1Q8NEM0 835 aa26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 XPNPEP1Q9NQW7 623 aa26.21■■□□□ 1.79
TSPAN4-203ENST00000397397 IGKV6-21A0A0C4DH24 114 aa26.2■■□□□ 1.78
TSPAN4-203ENST00000397397 CYP2C9P11712 490 aa26.2■■□□□ 1.78
TSPAN4-203ENST00000397397 GUCY2CP25092 1073 aa26.2■■□□□ 1.78
TSPAN4-203ENST00000397397 LRRC71Q8N4P6 559 aa26.2■■□□□ 1.78
TSPAN4-203ENST00000397397 DDX12PQ92771 950 aa26.2■■□□□ 1.78
TSPAN4-203ENST00000397397 C7orf25Q9BPX7 421 aa26.2■■□□□ 1.78
TSPAN4-203ENST00000397397 TRMT13Q9NUP7 481 aaKnown RBP26.2■■□□□ 1.78
TSPAN4-203ENST00000397397 NOD1Q9Y239 953 aa26.2■■□□□ 1.78
TSPAN4-203ENST00000397397 PCDHA2Q9Y5H9 948 aa26.2■■□□□ 1.78
TSPAN4-203ENST00000397397 GAS2O43903 313 aaKnown RBP26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 CASP1P29466 404 aa26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 CLCN3P51790 818 aa26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 FAM102BQ5T8I3 360 aa26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 TMEM143Q96AN5 459 aa26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 TIPINQ9BVW5 301 aa26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 TRIM9Q9C026 710 aa26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 TRPV6Q9H1D0 765 aa26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 BLZF1Q9H2G9 400 aa26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 POLD4Q9HCU8 107 aa26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 HOOK1Q9UJC3 728 aaKnown RBP26.19■■□□□ 1.78
TSPAN4-203ENST00000397397 MROH7Q68CQ1 1323 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 GTPBP6O43824 516 aaPredicted RBP26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 B4GALT4O60513 344 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 PRR29P0C7W0 189 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 TMOD1P28289 359 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 DNM2P50570 870 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 CACNB1Q02641 598 aaPredicted RBP26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 CUL4BQ13620 913 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 GIT2Q14161 759 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 RUFY4Q6ZNE9 571 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 REEP2Q9BRK0 252 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 GPRC5CQ9NQ84 441 aa26.18■■□□□ 1.78
TSPAN4-203ENST00000397397 HIP1RO75146 1068 aa26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 ASIC1P78348 528 aa26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 SNX17Q15036 470 aa26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 POSTNQ15063 836 aa26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 C1orf53Q5VUE5 145 aa26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 IER5Q5VY09 327 aa26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 ELOA2Q8IYF1 753 aaPredicted RBP26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 LINC01465Q8N7H1 131 aa26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 TCP11Q8WWU5 503 aa26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 FAM49AQ9H0Q0 323 aaPredicted RBP26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 POLR3FQ9H1D9 316 aaPredicted RBP26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 CLSTN2Q9H4D0 955 aa26.17■■□□□ 1.78
TSPAN4-203ENST00000397397 SMIM35A0A1B0GVV1 85 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 PQBP1O60828 265 aaKnown RBP26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 MYL1P05976 194 aa26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 MDM2Q00987 491 aaPredicted RBP26.16■■□□□ 1.78
TSPAN4-203ENST00000397397 MKRN4PQ13434 485 aaPredicted RBP26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms