RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 SPATA31C2B4DYI2 1134 aa14.78□□□□□ -0.04
SEC13-209ENST00000397117 DDX39AO00148 427 aaKnown RBP14.78□□□□□ -0.04
SEC13-209ENST00000397117 RGS20O76081 388 aa14.78□□□□□ -0.04
SEC13-209ENST00000397117 BAIAP3O94812 1187 aa14.78□□□□□ -0.04
SEC13-209ENST00000397117 TXNP10599 105 aaKnown RBP14.78□□□□□ -0.04
SEC13-209ENST00000397117 PLCG1P19174 1290 aa14.78□□□□□ -0.04
SEC13-209ENST00000397117 ITGB3BPQ13352 177 aaPredicted RBP14.78□□□□□ -0.04
SEC13-209ENST00000397117 CCDC62Q6P9F0 684 aa14.78□□□□□ -0.04
SEC13-209ENST00000397117 SPRED2Q7Z698 418 aa14.78□□□□□ -0.04
SEC13-209ENST00000397117 ELOA2Q8IYF1 753 aaPredicted RBP14.78□□□□□ -0.04
SEC13-209ENST00000397117 LRFN3Q9BTN0 628 aa14.78□□□□□ -0.04
SEC13-209ENST00000397117 MMTAG2Q9BU76 263 aaKnown RBP14.78□□□□□ -0.04
SEC13-209ENST00000397117 NT5C3AQ9H0P0 336 aa14.78□□□□□ -0.04
SEC13-209ENST00000397117 CUEDC2Q9H467 287 aa14.78□□□□□ -0.04
SEC13-209ENST00000397117 ARIH1Q9Y4X5 557 aaPredicted RBP14.78□□□□□ -0.04
SEC13-209ENST00000397117 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.77□□□□□ -0.04
SEC13-209ENST00000397117 ARIH2O95376 493 aa14.77□□□□□ -0.04
SEC13-209ENST00000397117 ICAM3P32942 547 aa14.77□□□□□ -0.04
SEC13-209ENST00000397117 ZNF445P59923 1031 aa14.77□□□□□ -0.04
SEC13-209ENST00000397117 E2F4Q16254 413 aa14.77□□□□□ -0.04
SEC13-209ENST00000397117 HLA-CQ95604 372 aa14.77□□□□□ -0.04
SEC13-209ENST00000397117 UNC45AQ9H3U1 944 aa14.77□□□□□ -0.04
SEC13-209ENST00000397117 COL4A4P53420 1690 aaPredicted RBP14.77□□□□□ -0.05
SEC13-209ENST00000397117 DHX15O43143 795 aaKnown RBP14.77□□□□□ -0.05
SEC13-209ENST00000397117 ATP9AO75110 1047 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 KRT76Q01546 638 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 PTGISQ16647 500 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 SASS6Q6UVJ0 657 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 RBM43Q6ZSC3 357 aaKnown RBP14.77□□□□□ -0.05
SEC13-209ENST00000397117 MIER3Q7Z3K6 550 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 SESTD1Q86VW0 696 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 AFAP1L1Q8TED9 768 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 EIF2AK1Q9BQI3 630 aaKnown RBP14.77□□□□□ -0.05
SEC13-209ENST00000397117 MAGEF1Q9HAY2 307 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 LMCD1Q9NZU5 365 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 SAMM50Q9Y512 469 aa14.77□□□□□ -0.05
SEC13-209ENST00000397117 LCHNA4D1U4 455 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 EML1O00423 815 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 TGFB3P10600 412 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 KCNA2P16389 499 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 RPA1P27694 616 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 HOXD11P31277 338 aaPredicted RBP14.76□□□□□ -0.05
SEC13-209ENST00000397117 AFMP43652 599 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 WDR5P61964 334 aaKnown RBP14.76□□□□□ -0.05
SEC13-209ENST00000397117 SEMA3FQ13275 785 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 PNOCQ13519 176 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 POSTNQ15063 836 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 GDF6Q6KF10 455 aaPredicted RBP14.76□□□□□ -0.05
SEC13-209ENST00000397117 PDXDC2PQ6P474 469 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 KCNV1Q6PIU1 500 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 LRSAM1Q6UWE0 723 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 GIMAP8Q8ND71 665 aaPredicted RBP14.76□□□□□ -0.05
SEC13-209ENST00000397117 CAGE1Q8TC20 777 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 DHX38Q92620 1227 aaKnown RBP14.76□□□□□ -0.05
SEC13-209ENST00000397117 KAT2BQ92831 832 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 PAGE5Q96GU1 130 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 POLR3CQ9BUI4 534 aaPredicted RBP14.76□□□□□ -0.05
SEC13-209ENST00000397117 KIAA1468Q9P260 1216 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 STK17AQ9UEE5 414 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 KIAA1024Q9UPX6 916 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 NOD1Q9Y239 953 aa14.76□□□□□ -0.05
SEC13-209ENST00000397117 NFASCO94856 1347 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 POTEB3A0JP26 581 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 SMC2O95347 1197 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 CXCL10P02778 98 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 KCNJ6P48051 423 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 JAK3P52333 1124 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 RBL2Q08999 1139 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 EPHA7Q15375 998 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 TMEM119Q4V9L6 283 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 HYIQ5T013 277 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 ZNF746Q6NUN9 644 aaPredicted RBP14.75□□□□□ -0.05
SEC13-209ENST00000397117 POTEBQ6S5H4 581 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 CATSPER3Q86XQ3 398 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 CCDC155Q8N6L0 562 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 AFG1LQ8WV93 481 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 PNMA5Q96PV4 448 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 SENP7Q9BQF6 1050 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 JPH1Q9HDC5 661 aaPredicted RBP14.75□□□□□ -0.05
SEC13-209ENST00000397117 TUFT1Q9NNX1 390 aa14.75□□□□□ -0.05
SEC13-209ENST00000397117 WDR64B1ANS9 1081 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 MED24O75448 989 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 MMP3P08254 477 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 SELPP16109 830 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 SFNP31947 248 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 AMPD3Q01432 767 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 CYP4A11Q02928 519 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 ARHGAP1Q07960 439 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 NEDD9Q14511 834 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 TCTN1Q2MV58 587 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 NAALADL2Q58DX5 795 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 B3GNT9Q6UX72 402 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 SV2BQ7L1I2 683 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 TMCO2Q7Z6W1 182 aaPredicted RBP14.74□□□□□ -0.05
SEC13-209ENST00000397117 TPH2Q8IWU9 490 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 GRAMD1CQ8IYS0 662 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 NEK9Q8TD19 979 aa14.74□□□□□ -0.05
SEC13-209ENST00000397117 ERCC4Q92889 916 aaPredicted RBP14.74□□□□□ -0.05
SEC13-209ENST00000397117 KHSRPQ92945 711 aaKnown RBP eCLIP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms