RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 UPP2O95045 317 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 STBD1O95210 358 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 CLCN3P51790 818 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 CDC42EP1Q00587 391 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 MTERF2Q49AM1 385 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 NCAPH2Q6IBW4 605 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 C4orf19Q8IY42 314 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 EXOC8Q8IYI6 725 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 YME1L1Q96TA2 773 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 SUGCTQ9HAC7 445 aa16.32■□□□□ 0.2
SEC13-208ENST00000397109 LCHNA4D1U4 455 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 GPR32O75388 356 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 VTNP04004 478 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 TRAPPC10P48553 1259 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 DNM2P50570 870 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 SPIRE1Q08AE8 756 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 KIZQ2M2Z5 673 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 OTUD6AQ7L8S5 288 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 NOSTRINQ8IVI9 506 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 LRRC71Q8N4P6 559 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 SLC17A8Q8NDX2 589 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 ARNTL2Q8WYA1 636 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 MTMR9Q96QG7 549 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 TGS1Q96RS0 853 aaKnown RBP16.31■□□□□ 0.2
SEC13-208ENST00000397109 ZSWIM4Q9H7M6 989 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 TTC12Q9H892 705 aaPredicted RBP16.31■□□□□ 0.2
SEC13-208ENST00000397109 CDHR5Q9HBB8 845 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 ERVK-5Q9HDB9 667 aa16.31■□□□□ 0.2
SEC13-208ENST00000397109 RNF216Q9NWF9 866 aaPredicted RBP16.31■□□□□ 0.2
SEC13-208ENST00000397109 LINC01553A4QN01 128 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 ARHGEF15O94989 841 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 ATP2B1P20020 1258 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 IGFBP4P22692 258 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 MCM7P33993 719 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 NLRP11P59045 1033 aaKnown RBP16.3■□□□□ 0.2
SEC13-208ENST00000397109 ERVK-21P61565 698 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 NFX1Q12986 1120 aaKnown RBP16.3■□□□□ 0.2
SEC13-208ENST00000397109 ADGRE1Q14246 886 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 ANO5Q75V66 913 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 NEK9Q8TD19 979 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 SP7Q8TDD2 431 aaPredicted RBP16.3■□□□□ 0.2
SEC13-208ENST00000397109 SAMD11Q96NU1 681 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 CEP89Q96ST8 783 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 OSMRQ99650 979 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 LXNQ9BS40 222 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 TSPYL2Q9H2G4 693 aaPredicted RBP16.3■□□□□ 0.2
SEC13-208ENST00000397109 CERS4Q9HA82 394 aa16.3■□□□□ 0.2
SEC13-208ENST00000397109 NOL7Q9UMY1 257 aaKnown RBP16.3■□□□□ 0.2
SEC13-208ENST00000397109 NOC2LQ9Y3T9 749 aaKnown RBP16.3■□□□□ 0.2
SEC13-208ENST00000397109 IGKV6-21A0A0C4DH24 114 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 WNT7AO00755 349 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 GTPBP6O43824 516 aaPredicted RBP16.29■□□□□ 0.2
SEC13-208ENST00000397109 U2AF2P26368 475 aaKnown RBP eCLIP16.29■□□□□ 0.25e-11■■□□□ 11.9
SEC13-208ENST00000397109 TXKP42681 527 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 NUCB2P80303 420 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 DYDC2Q96IM9 177 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 ADAMTS10Q9H324 1103 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 CYP26B1Q9NR63 512 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 RGL1Q9NZL6 768 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 ST3GAL5Q9UNP4 418 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 CHD7Q9P2D1 2997 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 RBAK-RBAKDNI3L0D1 243 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 MAFO75444 373 aaPredicted RBP16.29■□□□□ 0.2
SEC13-208ENST00000397109 STAG3L1P0CL83 205 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 POU3F3P20264 500 aaPredicted RBP16.29■□□□□ 0.2
SEC13-208ENST00000397109 EIF4BP23588 611 aaKnown RBP16.29■□□□□ 0.2
SEC13-208ENST00000397109 TMEM266Q2M3C6 531 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 TTC38Q5R3I4 469 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 RTN4RL1Q86UN2 441 aaPredicted RBP16.29■□□□□ 0.2
SEC13-208ENST00000397109 NPAS4Q8IUM7 802 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 TMEM40Q8WWA1 233 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 CEP170P1Q96L14 293 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 PPP1R16BQ96T49 567 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 EIF2AK1Q9BQI3 630 aaKnown RBP16.29■□□□□ 0.2
SEC13-208ENST00000397109 C1orf112Q9NSG2 853 aa16.29■□□□□ 0.2
SEC13-208ENST00000397109 TMEM150BA6NC51 233 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 GAS2O43903 313 aaKnown RBP16.28■□□□□ 0.2
SEC13-208ENST00000397109 SLITRK3O94933 977 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 LYPLA2O95372 231 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 YWHABP31946 246 aaKnown RBP16.28■□□□□ 0.2
SEC13-208ENST00000397109 RFC5P40937 340 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 GPC3P51654 580 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
SEC13-208ENST00000397109 NBR1Q14596 966 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 ZNF174Q15697 407 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 PLA2G4FQ68DD2 849 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 FAM228AQ86W67 206 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 TPH2Q8IWU9 490 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 LINC01599Q8WXQ3 324 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 SLC7A3Q8WY07 619 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 SCLT1Q96NL6 688 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 HSD17B14Q9BPX1 270 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 TMEM60Q9H2L4 133 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 TMX1Q9H3N1 280 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 SMC3Q9UQE7 1217 aa16.28■□□□□ 0.2
SEC13-208ENST00000397109 CDH23Q9H251 3354 aa16.27■□□□□ 0.2
SEC13-208ENST00000397109 DENND3A2RUS2 1198 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 OR52Z1P0C646 297 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 PTMSP20962 102 aa16.27■□□□□ 0.19
SEC13-208ENST00000397109 GJB2P29033 226 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms