RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 ADCY1Q08828 1119 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 MTMR1Q13613 665 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 NAALADL2Q58DX5 795 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 TRIM68Q6AZZ1 485 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 TBC1D1Q86TI0 1168 aaPredicted RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 KIAA0895Q8NCT3 520 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 KIFC3Q9BVG8 833 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 YY1AP1Q9H869 796 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 DNAJC17Q9NVM6 304 aaKnown RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 MYL1P05976 194 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 HDLBPQ00341 1268 aaKnown RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 MYL7Q01449 175 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 STRN3Q13033 797 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 SEPT7Q16181 437 aaKnown RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 WDR44Q5JSH3 913 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 PLA2G4FQ68DD2 849 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 PADI6Q6TGC4 694 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 CCDC26Q8TAB7 109 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 ZNF473Q8WTR7 871 aaKnown RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 GLIS2Q9BZE0 524 aaPredicted RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 PIM2Q9P1W9 311 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 UTP11Q9Y3A2 253 aaKnown RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 ANO9A1A5B4 782 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 ZSCAN5CA6NGD5 496 aaPredicted RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 TMOD1P28289 359 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 CASP4P49662 377 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 KCNB1Q14721 858 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 KNOP1Q1ED39 458 aaKnown RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 TTI2Q6NXR4 508 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 HHIPL2Q6UWX4 724 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 GLYCTKQ8IVS8 523 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 ZKSCAN4Q969J2 545 aaPredicted RBP13.2□□□□□ -0.3
ITGA4-203ENST00000397033 KBTBD4Q9NVX7 518 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 CAPN11Q9UMQ6 739 aa13.2□□□□□ -0.3
ITGA4-203ENST00000397033 PVALEFA0A1B0GWK0 134 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 PDE2AO00408 941 aaPredicted RBP13.19□□□□□ -0.3
ITGA4-203ENST00000397033 PRPHP41219 470 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 LIG4P49917 911 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 POLGP54098 1239 aaPredicted RBP13.19□□□□□ -0.3
ITGA4-203ENST00000397033 SNRNP48Q6IEG0 339 aaKnown RBP13.19□□□□□ -0.3
ITGA4-203ENST00000397033 PPP1R18Q6NYC8 613 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 CDAN1Q8IWY9 1227 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 RETREG2Q8NC44 543 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 HAUS2Q9NVX0 235 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 CAPN6Q9Y6Q1 641 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 BCRP11274 1271 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 SLCO1A2P46721 670 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 CEP55Q53EZ4 464 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 ZBTB33Q86T24 672 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 CCDC105Q8IYK2 499 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 CCDC63Q8NA47 563 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 NSRP1Q9H0G5 558 aaKnown RBP13.19□□□□□ -0.3
ITGA4-203ENST00000397033 AFDNP55196 1824 aaKnown RBP13.19□□□□□ -0.3
ITGA4-203ENST00000397033 HERVK_113P62684 666 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 KCNA1Q09470 495 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 SNX1Q13596 522 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 ANKRD42Q8N9B4 389 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 DEPTORQ8TB45 409 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 C7orf25Q9BPX7 421 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 KCPQ6ZWJ8 1503 aa13.19□□□□□ -0.3
ITGA4-203ENST00000397033 hCG_1984214I3L0E3 225 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 SRGAP2CP0DJJ0 459 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 CETN2P41208 172 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 DHX9Q08211 1270 aaKnown RBP13.18□□□□□ -0.3
ITGA4-203ENST00000397033 R3HDM1Q15032 1099 aaKnown RBP13.18□□□□□ -0.3
ITGA4-203ENST00000397033 ZNF713Q8N859 430 aaPredicted RBP13.18□□□□□ -0.3
ITGA4-203ENST00000397033 GPRC5CQ9NQ84 441 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 DNAJC12Q9UKB3 198 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 AMFRQ9UKV5 643 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 FMNL3Q8IVF7 1028 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 TTC16Q8NEE8 873 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 CNKSR2Q8WXI2 1034 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 THOC1Q96FV9 657 aaKnown RBP13.18□□□□□ -0.3
ITGA4-203ENST00000397033 PURBQ96QR8 312 aaKnown RBP13.18□□□□□ -0.3
ITGA4-203ENST00000397033 RUSC1Q9BVN2 902 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 GGT7Q9UJ14 662 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 MSH4O15457 936 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 DMP1Q13316 513 aaPredicted RBP13.18□□□□□ -0.3
ITGA4-203ENST00000397033 CDKAL1Q5VV42 579 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 USP37Q86T82 979 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 RTKN2Q8IZC4 609 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 PNMA5Q96PV4 448 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 MED15Q96RN5 788 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 KMT5AQ9NQR1 393 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 ASIC3Q9UHC3 531 aa13.18□□□□□ -0.3
ITGA4-203ENST00000397033 ARP10275 920 aa13.17□□□□□ -0.3
ITGA4-203ENST00000397033 CD58P19256 250 aa13.17□□□□□ -0.3
ITGA4-203ENST00000397033 SCP2P22307 547 aa13.17□□□□□ -0.3
ITGA4-203ENST00000397033 ELF1P32519 619 aa13.17□□□□□ -0.3
ITGA4-203ENST00000397033 DDX42Q86XP3 938 aaKnown RBP eCLIP13.17□□□□□ -0.3
ITGA4-203ENST00000397033 WDR11Q9BZH6 1224 aa13.17□□□□□ -0.3
ITGA4-203ENST00000397033 EPN3Q9H201 632 aa13.17□□□□□ -0.3
ITGA4-203ENST00000397033 METTL14Q9HCE5 456 aaKnown RBP13.17□□□□□ -0.3
ITGA4-203ENST00000397033 RNF146Q9NTX7 359 aa13.17□□□□□ -0.3
ITGA4-203ENST00000397033 TRPC6Q9Y210 931 aa13.17□□□□□ -0.3
ITGA4-203ENST00000397033 ITIH6Q6UXX5 1313 aa13.17□□□□□ -0.3
ITGA4-203ENST00000397033 IFNB1P01574 187 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms