RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 NME8Q8N427 588 aa18.29■□□□□ 0.52
AP1S3-202ENST00000396653 DPF3Q92784 378 aa18.29■□□□□ 0.52
AP1S3-202ENST00000396653 SH2D3AQ9BRG2 576 aa18.29■□□□□ 0.52
AP1S3-202ENST00000396653 NOC4LQ9BVI4 516 aaKnown RBP18.29■□□□□ 0.52
AP1S3-202ENST00000396653 BHMT2Q9H2M3 363 aa18.29■□□□□ 0.52
AP1S3-202ENST00000396653 ATP6V0A4Q9HBG4 840 aa18.29■□□□□ 0.52
AP1S3-202ENST00000396653 PRKAG2Q9UGJ0 569 aa18.29■□□□□ 0.52
AP1S3-202ENST00000396653 NR2E3Q9Y5X4 410 aa18.29■□□□□ 0.52
AP1S3-202ENST00000396653 EMC2Q15006 297 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 EFCAB12Q6NXP0 572 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 RUFY4Q6ZNE9 571 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 SYT2Q8N9I0 419 aaPredicted RBP18.28■□□□□ 0.52
AP1S3-202ENST00000396653 MCPH1Q8NEM0 835 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 LARP4BQ92615 738 aaKnown RBP18.28■□□□□ 0.52
AP1S3-202ENST00000396653 RAD54LQ92698 747 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 WNT8BQ93098 351 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 MAP7D2Q96T17 732 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 MTRQ99707 1265 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 HIPK3Q9H422 1215 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 CUEDC2Q9H467 287 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 BLOC1S4Q9NUP1 217 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 KCND2Q9NZV8 630 aa18.28■□□□□ 0.52
AP1S3-202ENST00000396653 PLA2G4BP0C869 781 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 STAT6P42226 847 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 SLC12A3P55017 1021 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 E2F4Q16254 413 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 NAALADL2Q58DX5 795 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 PADI6Q6TGC4 694 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 SH3RF1Q7Z6J0 888 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 LRRC15Q8TF66 581 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 TCP11Q8WWU5 503 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 PLIN2Q99541 437 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 TIPINQ9BVW5 301 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 XPNPEP1Q9NQW7 623 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 PRDM5Q9NQX1 630 aaPredicted RBP18.27■□□□□ 0.52
AP1S3-202ENST00000396653 HPSEQ9Y251 543 aa18.27■□□□□ 0.52
AP1S3-202ENST00000396653 A0A087WWV3 80 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 A0A087X0B3 334 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 TRIM43BA6NCK2 446 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 USO1O60763 962 aaKnown RBP18.26■□□□□ 0.51
AP1S3-202ENST00000396653 PARNO95453 639 aaKnown RBP18.26■□□□□ 0.51
AP1S3-202ENST00000396653 TIMP1P01033 207 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 CKBP12277 381 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 SELPP16109 830 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 CYP11B2P19099 503 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 DNM2P50570 870 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 CLCN3P51790 818 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 FAM26DQ5JW98 314 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 IER5Q5VY09 327 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 KIAA0319LQ8IZA0 1049 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 LRRC71Q8N4P6 559 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 METTL13Q8N6R0 699 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 DNAJB3Q8WWF6 145 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 MRPS27Q92552 414 aaKnown RBP18.26■□□□□ 0.51
AP1S3-202ENST00000396653 TRIM43Q96BQ3 446 aaPredicted RBP18.26■□□□□ 0.51
AP1S3-202ENST00000396653 ZBTB10Q96DT7 871 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 GBP4Q96PP9 640 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 FAM49AQ9H0Q0 323 aaPredicted RBP18.26■□□□□ 0.51
AP1S3-202ENST00000396653 MAGEF1Q9HAY2 307 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 KCNH3Q9ULD8 1083 aa18.26■□□□□ 0.51
AP1S3-202ENST00000396653 SCN5AQ14524 2016 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 MKI67P46013 3256 aaKnown RBP18.25■□□□□ 0.51
AP1S3-202ENST00000396653 GOLGA6L4A6NEF3 574 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 RAG1P15918 1043 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 PFKFB1P16118 471 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 GUCY2CP25092 1073 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 THPOP40225 353 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 MRPS6P82932 125 aaKnown RBP18.25■□□□□ 0.51
AP1S3-202ENST00000396653 CDC42EP1Q00587 391 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 MLLT1Q03111 559 aaPredicted RBP18.25■□□□□ 0.51
AP1S3-202ENST00000396653 MGAT3Q09327 533 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 MKRN4PQ13434 485 aaPredicted RBP18.25■□□□□ 0.51
AP1S3-202ENST00000396653 RINT1Q6NUQ1 792 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 LRRC8DQ7L1W4 858 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 PDILTQ8N807 584 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 IQUBQ8NA54 791 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 PPP1R12CQ9BZL4 782 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 SUGCTQ9HAC7 445 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 USP25Q9UHP3 1055 aa18.25■□□□□ 0.51
AP1S3-202ENST00000396653 M0QZ92 97 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 ZNF618Q5T7W0 954 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 TRAF7Q6Q0C0 670 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 C1orf186Q6ZWK4 172 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 FSIP1Q8NA03 581 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 PSPC1Q8WXF1 523 aaKnown RBP18.24■□□□□ 0.51
AP1S3-202ENST00000396653 RUSC1Q9BVN2 902 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 WNT8AQ9H1J5 351 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 TNMDQ9H2S6 317 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 AKT3Q9Y243 479 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 TRPV2Q9Y5S1 764 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 DNAH12Q6ZR08 3092 aa18.24■□□□□ 0.51
AP1S3-202ENST00000396653 UMODL1Q5DID0 1318 aa18.23■□□□□ 0.51
AP1S3-202ENST00000396653 A0A1B0GVL5 298 aa18.23■□□□□ 0.51
AP1S3-202ENST00000396653 RSPH10B2B2RC85 870 aa18.23■□□□□ 0.51
AP1S3-202ENST00000396653 POLR2DO15514 142 aaKnown RBP18.23■□□□□ 0.51
AP1S3-202ENST00000396653 ASAP2O43150 1006 aa18.23■□□□□ 0.51
AP1S3-202ENST00000396653 SSBP05455 408 aaKnown RBP eCLIP18.23■□□□□ 0.51
AP1S3-202ENST00000396653 IQCF3P0C7M6 154 aa18.23■□□□□ 0.51
AP1S3-202ENST00000396653 RSPH10BP0C881 870 aa18.23■□□□□ 0.51
AP1S3-202ENST00000396653 RFC2P35250 354 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms