RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 SLC26A2P50443 739 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 CRYBB1P53674 252 aaPredicted RBP9.65□□□□□ -0.87
SCFD1-202ENST00000396629 ANGPT1Q15389 498 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 CATIPQ7Z7H3 387 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 MXRA8Q9BRK3 442 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 SEMA4AQ9H3S1 761 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 PSTPIP2Q9H939 334 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 MYH9P35579 1960 aaKnown RBP9.65□□□□□ -0.87
SCFD1-202ENST00000396629 FANCMQ8IYD8 2048 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 ZNF292O60281 2723 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 COL1A2P08123 1366 aa9.65□□□□□ -0.87
SCFD1-202ENST00000396629 WDR81Q562E7 1941 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 MED19A0JLT2 244 aaPredicted RBP9.64□□□□□ -0.87
SCFD1-202ENST00000396629 HBP1O60381 514 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 EOMESO95936 686 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 ARP10275 920 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 RARS2Q5T160 578 aaKnown RBP9.64□□□□□ -0.87
SCFD1-202ENST00000396629 SLC39A11Q8N1S5 342 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 LRRC43Q8N309 656 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 DTWD2Q8NBA8 298 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 FLCNQ8NFG4 579 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 IGDCC4Q8TDY8 1250 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 RMDN1Q96DB5 314 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 RTP3Q9BQQ7 232 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 IL25Q9H293 177 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 KCNH7Q9NS40 1196 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 DZANK1Q9NVP4 752 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 PCDHA6Q9UN73 950 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 GINS2Q9Y248 185 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 PCDHA8Q9Y5H6 950 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 C2orf16Q68DN1 1984 aa9.64□□□□□ -0.87
SCFD1-202ENST00000396629 CYP21A2P08686 494 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 WEE2P0C1S8 567 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 PBX3P40426 434 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 SART3Q15020 963 aaKnown RBP9.63□□□□□ -0.87
SCFD1-202ENST00000396629 UBE2SQ16763 222 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 ZNF484Q5JVG2 852 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 ATAT1Q5SQI0 421 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 C12orf76Q8N812 135 aaPredicted RBP9.63□□□□□ -0.87
SCFD1-202ENST00000396629 LZTS2Q9BRK4 669 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 SDF4Q9BRK5 362 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 CYP26B1Q9NR63 512 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 SEC63Q9UGP8 760 aaKnown RBP9.63□□□□□ -0.87
SCFD1-202ENST00000396629 SPDYE3A6NKU9 549 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 ZBTB42B2RXF5 422 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 GPR32O75388 356 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 CXCL14O95715 111 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 KIF5BP33176 963 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 ANTXR2P58335 489 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 ITGB3BPQ13352 177 aaPredicted RBP9.63□□□□□ -0.87
SCFD1-202ENST00000396629 ABHD15Q6UXT9 468 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 SMC5Q8IY18 1101 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 SRBD1Q8N5C6 995 aaKnown RBP9.63□□□□□ -0.87
SCFD1-202ENST00000396629 SLC22A17Q8WUG5 538 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 OSMRQ99650 979 aa9.63□□□□□ -0.87
SCFD1-202ENST00000396629 DBR1Q9UK59 544 aaKnown RBP9.63□□□□□ -0.87
SCFD1-202ENST00000396629 DDAH1O94760 285 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 LMNAP02545 664 aaKnown RBP9.62□□□□□ -0.87
SCFD1-202ENST00000396629 GNAQP50148 359 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 TDGQ13569 410 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 KIZQ2M2Z5 673 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 KANK3Q6NY19 840 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 DGLUCYQ7Z3D6 616 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 ECHDC2Q86YB7 292 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 ZNF654Q8IZM8 581 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 NCOA7Q8NI08 942 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 CTCFLQ8NI51 663 aaPredicted RBP9.62□□□□□ -0.87
SCFD1-202ENST00000396629 CYP2W1Q8TAV3 490 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 AGO4Q9HCK5 861 aaKnown RBP9.62□□□□□ -0.87
SCFD1-202ENST00000396629 DUSP12Q9UNI6 340 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 IRAK3Q9Y616 596 aa9.62□□□□□ -0.87
SCFD1-202ENST00000396629 E7EWF7 191 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 PLEKHA8P1O95397 391 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 BMS1Q14692 1282 aaKnown RBP9.61□□□□□ -0.87
SCFD1-202ENST00000396629 CLLU1OSQ5K130 101 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 FAM160B1Q5W0V3 765 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 RALYLQ86SE5 291 aaKnown RBP9.61□□□□□ -0.87
SCFD1-202ENST00000396629 CHD1LQ86WJ1 897 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 ABI1Q8IZP0 508 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 ACSF2Q96CM8 615 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-202ENST00000396629 MYL10Q9BUA6 226 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 ZBP1Q9H171 429 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 LY9Q9HBG7 655 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 TAF6LQ9Y6J9 622 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 DMXL1Q9Y485 3027 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 C22orf31O95567 290 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 CCNE2O96020 404 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 EPCAMP16422 314 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 ATP4AP20648 1035 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 POLGP54098 1239 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-202ENST00000396629 GIT2Q14161 759 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 PUM1Q14671 1186 aaKnown RBP eCLIP9.61□□□□□ -0.87
SCFD1-202ENST00000396629 OTOP3Q7RTS5 596 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 GPR149Q86SP6 731 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 ZNF598Q86UK7 904 aaKnown RBP9.61□□□□□ -0.87
SCFD1-202ENST00000396629 MB21D2Q8IYB1 491 aaPredicted RBP9.61□□□□□ -0.87
SCFD1-202ENST00000396629 FEZF2Q8TBJ5 459 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 PPP1R16BQ96T49 567 aa9.61□□□□□ -0.87
SCFD1-202ENST00000396629 MEIS1O00470 390 aa9.6□□□□□ -0.87
SCFD1-202ENST00000396629 VTNP04004 478 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms