RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 TRIM50Q86XT4 487 aa19.55■□□□□ 0.72
TNFSF13-205ENST00000396545 HLA-CQ95604 372 aa19.55■□□□□ 0.72
TNFSF13-205ENST00000396545 TUBE1Q9UJT0 475 aa19.55■□□□□ 0.72
TNFSF13-205ENST00000396545 TELO2Q9Y4R8 837 aa19.55■□□□□ 0.72
TNFSF13-205ENST00000396545 LAD1O00515 517 aa19.54■□□□□ 0.72
TNFSF13-205ENST00000396545 ATP2B1P20020 1258 aa19.54■□□□□ 0.72
TNFSF13-205ENST00000396545 ATP2C1P98194 919 aaPredicted RBP19.54■□□□□ 0.72
TNFSF13-205ENST00000396545 KRBA2Q6ZNG9 492 aa19.54■□□□□ 0.72
TNFSF13-205ENST00000396545 ZSCAN30Q86W11 494 aa19.54■□□□□ 0.72
TNFSF13-205ENST00000396545 INSL6Q9Y581 213 aa19.54■□□□□ 0.72
TNFSF13-205ENST00000396545 AMHP03971 560 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 ADAM17P78536 824 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 HTRA4P83105 476 aaPredicted RBP19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 AP3B2Q13367 1082 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 ARL6IP4Q66PJ3 421 aaKnown RBP19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 MYOCDQ8IZQ8 938 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 ERCC4Q92889 916 aaPredicted RBP19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 NAP1L4Q99733 375 aaKnown RBP19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 BPIFA3Q9BQP9 254 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 OSBPL7Q9BZF2 842 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 CSRNP2Q9H175 543 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 SETD4Q9NVD3 440 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 ZNF215Q9UL58 517 aaPredicted RBP19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 FOSP01100 380 aaPredicted RBP19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 CTSHP09668 335 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 GNAT1P11488 350 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 CLK2P49760 499 aaKnown RBP19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 NLRP12P59046 1061 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 LONRF3Q496Y0 759 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 NEK8Q86SG6 692 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 CEP57L1Q8IYX8 460 aa19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 SP7Q8TDD2 431 aaPredicted RBP19.53■□□□□ 0.72
TNFSF13-205ENST00000396545 ZNF174Q15697 407 aa19.52■□□□□ 0.71
TNFSF13-205ENST00000396545 SPECC1Q5M775 1068 aa19.52■□□□□ 0.71
TNFSF13-205ENST00000396545 NLRX1Q86UT6 975 aa19.52■□□□□ 0.71
TNFSF13-205ENST00000396545 RASGRP4Q8TDF6 673 aa19.52■□□□□ 0.71
TNFSF13-205ENST00000396545 LMBR1Q8WVP7 490 aa19.52■□□□□ 0.71
TNFSF13-205ENST00000396545 SEPT8Q92599 483 aa19.52■□□□□ 0.71
TNFSF13-205ENST00000396545 COL9A1P20849 921 aa19.51■□□□□ 0.71
TNFSF13-205ENST00000396545 SP4Q02446 784 aa19.51■□□□□ 0.71
TNFSF13-205ENST00000396545 UTP14CQ5TAP6 766 aaKnown RBP19.51■□□□□ 0.71
TNFSF13-205ENST00000396545 DHX40Q8IX18 779 aaKnown RBP19.51■□□□□ 0.71
TNFSF13-205ENST00000396545 GIMAP8Q8ND71 665 aaPredicted RBP19.51■□□□□ 0.71
TNFSF13-205ENST00000396545 CNNM3Q8NE01 707 aa19.51■□□□□ 0.71
TNFSF13-205ENST00000396545 GPRASP2Q96D09 838 aa19.51■□□□□ 0.71
TNFSF13-205ENST00000396545 C17orf80Q9BSJ5 609 aa19.51■□□□□ 0.71
TNFSF13-205ENST00000396545 NAT10Q9H0A0 1025 aaKnown RBP19.51■□□□□ 0.71
TNFSF13-205ENST00000396545 COL4A6Q14031 1691 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 KCNA2P16389 499 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 ARHGAP4P98171 946 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 PTGDRQ13258 359 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 INF2Q27J81 1249 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 DPCR1Q3MIW9 517 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 FAM26DQ5JW98 314 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 SARM1Q6SZW1 724 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 C4orf32Q8N8J7 132 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 NRCAMQ92823 1304 aa19.5■□□□□ 0.71
TNFSF13-205ENST00000396545 A0A087WWV3 80 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 ACTN4O43707 911 aaKnown RBP19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 ATP9AO75110 1047 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 GCFC2P16383 781 aaKnown RBP19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 ITGB5P18084 799 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 CLCN1P35523 988 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 TCF7P36402 384 aaPredicted RBP19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 PRPHP41219 470 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 JAKMIP3Q5VZ66 844 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 APBB2Q92870 758 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 TOP1MTQ969P6 601 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 CDHR1Q96JP9 859 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 HOOK1Q9UJC3 728 aaKnown RBP19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 POLR2DO15514 142 aaKnown RBP19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 ZRSR1Q15695 479 aaKnown RBP19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 KANK3Q6NY19 840 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 USP49Q70CQ1 688 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 PLA2G4DQ86XP0 818 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 FBXO22Q8NEZ5 403 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 TBCKQ8TEA7 893 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 ZKSCAN5Q9Y2L8 839 aa19.49■□□□□ 0.71
TNFSF13-205ENST00000396545 GOLGA6L19H0YKK7 550 aa19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 MCM7P33993 719 aa19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 USP11P51784 963 aa19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 PNOCQ13519 176 aa19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 UBE2SQ16763 222 aa19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 NT5DC1Q5TFE4 455 aa19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 RPAINQ86UA6 219 aa19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 IFIH1Q9BYX4 1025 aaKnown RBP19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 RTN4Q9NQC3 1192 aaKnown RBP19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 SERTAD1Q9UHV2 236 aa19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 UBIAD1Q9Y5Z9 338 aa19.48■□□□□ 0.71
TNFSF13-205ENST00000396545 CHRNA1P02708 482 aa19.47■□□□□ 0.71
TNFSF13-205ENST00000396545 PTMAP06454 111 aaKnown RBP19.47■□□□□ 0.71
TNFSF13-205ENST00000396545 ZNF75DP51815 510 aa19.47■□□□□ 0.71
TNFSF13-205ENST00000396545 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
TNFSF13-205ENST00000396545 MTMR1Q13613 665 aa19.47■□□□□ 0.71
TNFSF13-205ENST00000396545 EPC2Q52LR7 807 aa19.47■□□□□ 0.71
TNFSF13-205ENST00000396545 PPP4R3AQ6IN85 833 aa19.47■□□□□ 0.71
TNFSF13-205ENST00000396545 TAF2Q6P1X5 1199 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms