RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 PCDHA10Q9Y5I2 948 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 HOXD13P35453 343 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 RARRES1P49788 294 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 XKR9Q5GH70 373 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 RPGRIP1Q96KN7 1286 aa17.68■□□□□ 0.42
SNX6-202ENST00000396526 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.68■□□□□ 0.42
SNX6-202ENST00000396526 ATP2A1O14983 1001 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 TGFB1I1O43294 461 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 MAEAQ7L5Y9 396 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 EXOC7Q9UPT5 735 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 LCA5LO95447 670 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 CCDC172P0C7W6 258 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 PRKG1Q13976 671 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 BMS1Q14692 1282 aaKnown RBP17.67■□□□□ 0.42
SNX6-202ENST00000396526 PPP2R5AQ15172 486 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 AIPL1Q9NZN9 384 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 WRAP73Q9P2S5 460 aaPredicted RBP17.67■□□□□ 0.42
SNX6-202ENST00000396526 TRIM10Q9UDY6 481 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 ATAD5Q96QE3 1844 aa17.67■□□□□ 0.42
SNX6-202ENST00000396526 PLEKP08567 350 aaPredicted RBP17.66■□□□□ 0.42
SNX6-202ENST00000396526 PLS3P13797 630 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 CYP2J2P51589 502 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 SNRPFP62306 86 aaKnown RBP17.66■□□□□ 0.42
SNX6-202ENST00000396526 ARID5AQ03989 594 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 SMAP1Q8IYB5 467 aaPredicted RBP17.66■□□□□ 0.42
SNX6-202ENST00000396526 LACRTQ9GZZ8 138 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 SPON1Q9HCB6 807 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 OGFRQ9NZT2 677 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 JRKLQ9Y4A0 524 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 C10orf76Q5T2E6 689 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 CCDC70Q6NSX1 233 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 LRRN4CLQ8ND94 238 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 CAGE1Q8TC20 777 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 MOV10L1Q9BXT6 1211 aaKnown RBP17.66■□□□□ 0.42
SNX6-202ENST00000396526 AGPAT3Q9NRZ7 376 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 KCNG1Q9UIX4 513 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 ADAMTS5Q9UNA0 930 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 NOL4O94818 638 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 UCHL3P15374 230 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 H2AFXP16104 143 aaPredicted RBP17.66■□□□□ 0.42
SNX6-202ENST00000396526 NF2P35240 595 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 KCNA1Q09470 495 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 RSRC2Q7L4I2 434 aaKnown RBP17.66■□□□□ 0.42
SNX6-202ENST00000396526 RNF10Q8N5U6 811 aaKnown RBP17.66■□□□□ 0.42
SNX6-202ENST00000396526 NOX5Q96PH1 765 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 ADARB2Q9NS39 739 aaKnown RBP17.66■□□□□ 0.42
SNX6-202ENST00000396526 FBXO40Q9UH90 709 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 DAAM1Q9Y4D1 1078 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 RIPK3Q9Y572 518 aa17.66■□□□□ 0.42
SNX6-202ENST00000396526 ABL1P00519 1130 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 CASP4P49662 377 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 KLHDC7AQ5VTJ3 777 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 SLC9A9Q8IVB4 645 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 CHST13Q8NET6 341 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 SLC35C1Q96A29 364 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 GCNT4Q9P109 453 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 FBXL5Q9UKA1 691 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 ZNF214Q9UL59 606 aaPredicted RBP17.65■□□□□ 0.42
SNX6-202ENST00000396526 BRCA1P38398 1863 aaKnown RBP17.65■□□□□ 0.42
SNX6-202ENST00000396526 ERLIN1O75477 346 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 PSAPP07602 524 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 ANXA13P27216 316 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 FAM133AQ8N9E0 248 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 AFG3L2Q9Y4W6 797 aa17.65■□□□□ 0.42
SNX6-202ENST00000396526 N4BP1O75113 896 aaKnown RBP17.64■□□□□ 0.41
SNX6-202ENST00000396526 SLC9A1P19634 815 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 PON1P27169 355 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 TMEM132BQ14DG7 1078 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 ENOX2Q16206 610 aaKnown RBP17.64■□□□□ 0.41
SNX6-202ENST00000396526 PAPD7Q5XG87 772 aaKnown RBP17.64■□□□□ 0.41
SNX6-202ENST00000396526 TRMT1LQ7Z2T5 733 aaKnown RBP17.64■□□□□ 0.41
SNX6-202ENST00000396526 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.64■□□□□ 0.41
SNX6-202ENST00000396526 INPP4AQ96PE3 977 aaPredicted RBP17.64■□□□□ 0.41
SNX6-202ENST00000396526 GANQ9H2C0 597 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 IREB2P48200 963 aaKnown RBP17.64■□□□□ 0.41
SNX6-202ENST00000396526 SLC18A3Q16572 532 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 SH3D19Q5HYK7 790 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 FAM102BQ5T8I3 360 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 INTS8Q75QN2 995 aaKnown RBP17.64■□□□□ 0.41
SNX6-202ENST00000396526 ANKRD35Q8N283 1001 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 REPS2Q8NFH8 660 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 ARFGAP3Q9NP61 516 aa17.64■□□□□ 0.41
SNX6-202ENST00000396526 PJA2O43164 708 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 ATP9AO75110 1047 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 IFI16Q16666 785 aaKnown RBP17.63■□□□□ 0.41
SNX6-202ENST00000396526 TRAPPC11Q7Z392 1133 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 SENP7Q9BQF6 1050 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 TSKSQ9UJT2 592 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 ENC1O14682 589 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 FERP16591 822 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 MCM3P25205 808 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 GFPT1Q06210 699 aaPredicted RBP17.63■□□□□ 0.41
SNX6-202ENST00000396526 HAUS6Q7Z4H7 955 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 PURBQ96QR8 312 aaKnown RBP17.63■□□□□ 0.41
SNX6-202ENST00000396526 CYP39A1Q9NYL5 469 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 ABCD1P33897 745 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 STAT1P42224 750 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 CLCN6P51797 869 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 MAPK7Q13164 816 aa17.63■□□□□ 0.41
SNX6-202ENST00000396526 DMP1Q13316 513 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms