RNA–Protein interactions for RNA: ENST00000395963.2

CCR9-203, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-203ENST00000395963 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.79□□□□□ -0.84
CCR9-203ENST00000395963 EIF3DO15371 548 aaKnown RBP eCLIP9.79□□□□□ -0.84
CCR9-203ENST00000395963 ASAP2O43150 1006 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 ADAMTS4O75173 837 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 KRT18P05783 430 aaKnown RBP9.79□□□□□ -0.84
CCR9-203ENST00000395963 ERCC5P28715 1186 aaPredicted RBP9.79□□□□□ -0.84
CCR9-203ENST00000395963 ASIC1P78348 528 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 XKR9Q5GH70 373 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 ANO5Q75V66 913 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 RETREG2Q8NC44 543 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 ARRDC4Q8NCT1 418 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 SPIRE2Q8WWL2 714 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 SLC7A3Q8WY07 619 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 MTRQ99707 1265 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 PDLIM7Q9NR12 457 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 CGNQ9P2M7 1197 aaKnown RBP9.79□□□□□ -0.84
CCR9-203ENST00000395963 NRCAMQ92823 1304 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 SYNRGQ9UMZ2 1314 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 DOCK5Q9H7D0 1870 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 IGKV6-21A0A0C4DH24 114 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 MYMKA6NI61 221 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 H3BRB1 525 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 DYNC1LI2O43237 492 aaPredicted RBP9.79□□□□□ -0.84
CCR9-203ENST00000395963 KLRC4O43908 158 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 MAFO75444 373 aaPredicted RBP9.79□□□□□ -0.84
CCR9-203ENST00000395963 PLCB4Q15147 1175 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 UGCGQ16739 394 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 ARMC5Q96C12 935 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 CEP170P1Q96L14 293 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 TUT1Q9H6E5 874 aaKnown RBP9.79□□□□□ -0.84
CCR9-203ENST00000395963 PARVGQ9HBI0 331 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 XPNPEP3Q9NQH7 507 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 WRAP73Q9P2S5 460 aaPredicted RBP9.79□□□□□ -0.84
CCR9-203ENST00000395963 SEPT9Q9UHD8 586 aaPredicted RBP9.79□□□□□ -0.84
CCR9-203ENST00000395963 PTCH2Q9Y6C5 1203 aa9.79□□□□□ -0.84
CCR9-203ENST00000395963 HOXC8P31273 242 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 AFMP43652 599 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 TYRO3Q06418 890 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 PNOCQ13519 176 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 CUL4BQ13620 913 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 GIT2Q14161 759 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 PCBP1Q15365 356 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCR9-203ENST00000395963 BMT2Q1RMZ1 405 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 IER5Q5VY09 327 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 CKAP2LQ8IYA6 745 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 LRRC15Q8TF66 581 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 TMEM174Q8WUU8 243 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 COPS5Q92905 334 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 CEP89Q96ST8 783 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 TSPY26PQ9H489 355 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 PAK6Q9NQU5 681 aaPredicted RBP9.78□□□□□ -0.84
CCR9-203ENST00000395963 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.78□□□□□ -0.84
CCR9-203ENST00000395963 MAN1B1Q9UKM7 699 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 FAM13AO94988 1023 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 ATP4AP20648 1035 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 DNM2P50570 870 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 MXD4Q14582 209 aaPredicted RBP9.78□□□□□ -0.84
CCR9-203ENST00000395963 PPP4R3CPQ6ZMV5 832 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 GUF1Q8N442 669 aaKnown RBP9.78□□□□□ -0.84
CCR9-203ENST00000395963 ANKLE1Q8NAG6 615 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 DHTKD1Q96HY7 919 aaPredicted RBP9.78□□□□□ -0.84
CCR9-203ENST00000395963 NTPCRQ9BSD7 190 aaKnown RBP9.78□□□□□ -0.84
CCR9-203ENST00000395963 NFKBIZQ9BYH8 718 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCR9-203ENST00000395963 PANK4Q9NVE7 773 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 ZKSCAN5Q9Y2L8 839 aa9.78□□□□□ -0.84
CCR9-203ENST00000395963 SYCE3A1L190 88 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 VGLL3A8MV65 326 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 IKBKBO14920 756 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 CAND2O75155 1236 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 PLS3P13797 630 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 TMOD1P28289 359 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
CCR9-203ENST00000395963 POLGP54098 1239 aaPredicted RBP9.77□□□□□ -0.85
CCR9-203ENST00000395963 PSMC6P62333 389 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 PURAQ00577 322 aaKnown RBP9.77□□□□□ -0.85
CCR9-203ENST00000395963 CAP1Q01518 475 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 CAMK4Q16566 473 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 NFIL3Q16649 462 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 KMT5BQ4FZB7 885 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 SLC9C1Q4G0N8 1177 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 ARSHQ5FYA8 562 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 FAM26FQ5R3K3 315 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 CCSAPQ6IQ19 270 aaPredicted RBP9.77□□□□□ -0.85
CCR9-203ENST00000395963 NFRKBQ6P4R8 1299 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 PIGOQ8TEQ8 1089 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 REEP2Q9BRK0 252 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 BICDL2A1A5D9 508 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 SMTNL1A8MU46 457 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 ADCY6O43306 1168 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 SSBP05455 408 aaKnown RBP eCLIP9.77□□□□□ -0.85
CCR9-203ENST00000395963 PRR29P0C7W0 189 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 ELNP15502 786 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 PSEN2P49810 448 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 SMTNP53814 917 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 TBC1D8BQ0IIM8 1120 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 COASYQ13057 564 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 MYBPC2Q14324 1141 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 MFSD10Q14728 455 aa9.77□□□□□ -0.85
CCR9-203ENST00000395963 EMC2Q15006 297 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms