RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 GBP1P32455 592 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 NCAPHQ15003 741 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 DPCR1Q3MIW9 517 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 NLRP10Q86W26 655 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 RAB11FIP4Q86YS3 637 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 CCNJLQ8IV13 435 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 TRPC4APQ8TEL6 797 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 JDP2Q8WYK2 163 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 RRP36Q96EU6 259 aaKnown RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 TCEANC2Q96MN5 208 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 GPR108Q9NPR9 543 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 SH2B1Q9NRF2 756 aaPredicted RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 ZNF277Q9NRM2 450 aaPredicted RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 PAG1Q9NWQ8 432 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 LINC00854A0A1B0GVQ3 168 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 SPECC1L-ADORA2AF8WAN1 911 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 CIAO1O76071 339 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 CSF1RP07333 972 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 SPATA31D3P0C874 917 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 GNAZP19086 355 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 ERCC5P28715 1186 aaPredicted RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 ATICP31939 592 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 CACNA2D1P54289 1103 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 EIF6P56537 245 aaKnown RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 AMPD2Q01433 879 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 FAM160A1Q05DH4 1040 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 TBL3Q12788 808 aaKnown RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 PDCD4Q53EL6 469 aaKnown RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 SPATA31D4Q6ZUB0 917 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 ATP8B4Q8TF62 1192 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 MRGBPQ9NV56 204 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 ABT1Q9ULW3 272 aaKnown RBP9.62□□□□□ -0.87
MSH5-205ENST00000395853 ADGRG1Q9Y653 693 aa9.62□□□□□ -0.87
MSH5-205ENST00000395853 TRPM7Q96QT4 1865 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 RIC1Q4ADV7 1423 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 CYTH3O43739 400 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 ZBED4O75132 1171 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 OXSR1O95747 527 aaPredicted RBP9.61□□□□□ -0.87
MSH5-205ENST00000395853 ATP1A3P13637 1013 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 ADORA1P30542 326 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 PEX5P50542 639 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 KCNJ2P63252 427 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 ITGB3BPQ13352 177 aaPredicted RBP9.61□□□□□ -0.87
MSH5-205ENST00000395853 SH3D19Q5HYK7 790 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 USP50Q70EL3 339 aaPredicted RBP9.61□□□□□ -0.87
MSH5-205ENST00000395853 CACNA2D4Q7Z3S7 1137 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 CPLX4Q7Z7G2 160 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 TC2NQ8N9U0 490 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 KBTBD3Q8NAB2 608 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 MIGA1Q8NAN2 632 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 C1orf131Q8NDD1 294 aaKnown RBP9.61□□□□□ -0.87
MSH5-205ENST00000395853 DNAJC9Q8WXX5 260 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 SKA1Q96BD8 255 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 FAM136AQ96C01 138 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 CCDC42Q96M95 316 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 GBA3Q9H227 469 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 COMMD10Q9Y6G5 202 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 B3GALNT1O75752 331 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 WFS1O76024 890 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 CYP1A2P05177 515 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 SLC16A2P36021 539 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 ST3GAL1Q11201 340 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 CFAP58Q5T655 872 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 TMCO4Q5TGY1 634 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 MAP1SQ66K74 1059 aaPredicted RBP9.61□□□□□ -0.87
MSH5-205ENST00000395853 PHLDB3Q6NSJ2 640 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 EMBQ6PCB8 327 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 SIX5Q8N196 739 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 CCDC197Q8NCU1 140 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 DPF2Q92785 391 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 HHIPL1Q96JK4 782 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 ZSCAN31Q96LW9 406 aaPredicted RBP9.61□□□□□ -0.87
MSH5-205ENST00000395853 ZIM3Q96PE6 472 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 PLA2G12BQ9BX93 195 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 VPS33BQ9H267 617 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 PARVBQ9HBI1 364 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 BTBD7Q9P203 1132 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 ANKRD36CQ5JPF3 1778 aa9.61□□□□□ -0.87
MSH5-205ENST00000395853 IFIT1P09914 478 aaKnown RBP9.6□□□□□ -0.87
MSH5-205ENST00000395853 UBL4AP11441 157 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 PAK2Q13177 524 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 TBX2Q13207 712 aaPredicted RBP9.6□□□□□ -0.87
MSH5-205ENST00000395853 MCMDC2Q4G0Z9 681 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 BOLA3Q53S33 107 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 NECAB1Q8N987 351 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 TTLL11Q8NHH1 800 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 CAPNS2Q96L46 248 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 ATP6V1G3Q96LB4 118 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 PLAAQ9Y263 795 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 LRCH1Q9Y2L9 728 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 TMA7Q9Y2S6 64 aaKnown RBP9.6□□□□□ -0.87
MSH5-205ENST00000395853 TLL2Q9Y6L7 1015 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 MYH3P11055 1940 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 SERPINB7O75635 380 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 ASMTLO95671 621 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 LDHBP07195 334 aaKnown RBP9.6□□□□□ -0.87
MSH5-205ENST00000395853 S100A5P33763 92 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 EPHB4P54760 987 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 TUBA4AP68366 448 aa9.6□□□□□ -0.87
MSH5-205ENST00000395853 CKAP4Q07065 602 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms