RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 SYPP08247 313 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 ENDOUP21128 410 aaKnown RBP6.99□□□□□ -1.29
AP3S1-202ENST00000395548 KIR2DL1P43626 348 aaPredicted RBP6.99□□□□□ -1.29
AP3S1-202ENST00000395548 KIR2DL2P43627 348 aaPredicted RBP6.99□□□□□ -1.29
AP3S1-202ENST00000395548 GPSM2P81274 684 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 SNW1Q13573 536 aaKnown RBP6.99□□□□□ -1.29
AP3S1-202ENST00000395548 SLC14A2Q15849 920 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 TIGD5Q53EQ6 642 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 TMEM192Q8IY95 271 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 COA7Q96BR5 231 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 INTS4Q96HW7 963 aaKnown RBP6.99□□□□□ -1.29
AP3S1-202ENST00000395548 ZNF512BQ96KM6 892 aaPredicted RBP6.99□□□□□ -1.29
AP3S1-202ENST00000395548 FERD3LQ96RJ6 166 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 SLC9A7Q96T83 725 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 G6PC3Q9BUM1 346 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 CARD11Q9BXL7 1154 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 IRF2BPLQ9H1B7 796 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 CHST7Q9NS84 486 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 EBF1Q9UH73 591 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 FBXL21Q9UKT6 434 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 UNC79Q9P2D8 2635 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 ANKRD11Q6UB99 2663 aaPredicted RBP6.99□□□□□ -1.29
AP3S1-202ENST00000395548 ZNF804BA4D1E1 1349 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 UBN2Q6ZU65 1347 aa6.99□□□□□ -1.29
AP3S1-202ENST00000395548 DDX60LQ5H9U9 1706 aaKnown RBP6.98□□□□□ -1.29
AP3S1-202ENST00000395548 ZFHX2Q9C0A1 2572 aaPredicted RBP6.98□□□□□ -1.29
AP3S1-202ENST00000395548 GLDCP23378 1020 aa6.98□□□□□ -1.29
AP3S1-202ENST00000395548 ANKRD23Q86SG2 305 aa6.98□□□□□ -1.29
AP3S1-202ENST00000395548 ZNF34Q8IZ26 560 aa6.98□□□□□ -1.29
AP3S1-202ENST00000395548 ZKSCAN4Q969J2 545 aaPredicted RBP6.98□□□□□ -1.29
AP3S1-202ENST00000395548 MAP6Q96JE9 813 aa6.98□□□□□ -1.29
AP3S1-202ENST00000395548 PARK7Q99497 189 aaKnown RBP6.98□□□□□ -1.29
AP3S1-202ENST00000395548 PRR13Q9NZ81 148 aa6.98□□□□□ -1.29
AP3S1-202ENST00000395548 ARID1BQ8NFD5 2236 aaPredicted RBP6.98□□□□□ -1.29
AP3S1-202ENST00000395548 CHD6Q8TD26 2715 aa6.98□□□□□ -1.29
AP3S1-202ENST00000395548 PTPRZ1P23471 2315 aaPredicted RBP6.98□□□□□ -1.29
AP3S1-202ENST00000395548 TRANK1O15050 2925 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 TCAF2A6NFQ2 919 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 PDHXO00330 501 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 SCAMP3O14828 347 aaKnown RBP6.97□□□□□ -1.29
AP3S1-202ENST00000395548 PSPNO60542 156 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 PEX10O60683 326 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 UFL1O94874 794 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 KRT1P04264 644 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 MED14OSP0DP75 135 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 AUHQ13825 339 aaKnown RBP6.97□□□□□ -1.29
AP3S1-202ENST00000395548 DLGAP5Q15398 846 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 ZNF394Q53GI3 561 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 ATG14Q6ZNE5 492 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 ERO1BQ86YB8 467 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 CILP2Q8IUL8 1156 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 TAB3Q8N5C8 712 aaPredicted RBP6.97□□□□□ -1.29
AP3S1-202ENST00000395548 BADQ92934 168 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 TM9SF2Q99805 663 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 KCNK12Q9HB15 430 aa6.97□□□□□ -1.29
AP3S1-202ENST00000395548 SUCOQ9UBS9 1254 aaKnown RBP6.97□□□□□ -1.29
AP3S1-202ENST00000395548 REV3LO60673 3130 aa6.96□□□□□ -1.29
AP3S1-202ENST00000395548 ETV2O00321 342 aaPredicted RBP6.96□□□□□ -1.3
AP3S1-202ENST00000395548 NRDCO43847 1150 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 CFPP27918 469 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 TNFAIP1Q13829 316 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 VGLL4Q14135 290 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 STRIP1Q5VSL9 837 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 CEP128Q6ZU80 1094 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 ZNF605Q86T29 641 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 LRRC56Q8IYG6 542 aaPredicted RBP6.96□□□□□ -1.3
AP3S1-202ENST00000395548 ZBED3Q96IU2 234 aaPredicted RBP6.96□□□□□ -1.3
AP3S1-202ENST00000395548 CRTAC1Q9NQ79 661 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 GFOD1Q9NXC2 390 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 DDX41Q9UJV9 622 aaKnown RBP6.96□□□□□ -1.3
AP3S1-202ENST00000395548 PCDHGB7Q9Y5F8 929 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 SCN9AQ15858 1988 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 LRRC37AA6NMS7 1700 aa6.96□□□□□ -1.3
AP3S1-202ENST00000395548 CHD9Q3L8U1 2897 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 NPIPB6E9PJ23 425 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 PPIL2Q13356 520 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 KCNA10Q16322 511 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 BBS9Q3SYG4 887 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 FBLN7Q53RD9 439 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 DACT2Q5SW24 774 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 FBXW10Q5XX13 1052 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 CCDC129Q6ZRS4 1044 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 NLRX1Q86UT6 975 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 CCDC144CPQ8IYA2 1237 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 ZNF654Q8IZM8 581 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 RBBP8NLQ8NC74 664 aaPredicted RBP6.95□□□□□ -1.3
AP3S1-202ENST00000395548 FCRL2Q96LA5 508 aaPredicted RBP6.95□□□□□ -1.3
AP3S1-202ENST00000395548 SENP6Q9GZR1 1112 aaPredicted RBP6.95□□□□□ -1.3
AP3S1-202ENST00000395548 ZNF552Q9H707 407 aaPredicted RBP6.95□□□□□ -1.3
AP3S1-202ENST00000395548 TNFRSF10DQ9UBN6 386 aa6.95□□□□□ -1.3
AP3S1-202ENST00000395548 OR14I1A6ND48 311 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 NOTOA8MTQ0 251 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 DCXO43602 365 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 SEMA7AO75326 666 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 ACRP10323 421 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 ERCC5P28715 1186 aaPredicted RBP6.94□□□□□ -1.3
AP3S1-202ENST00000395548 PMS1P54277 932 aaKnown RBP6.94□□□□□ -1.3
AP3S1-202ENST00000395548 RTP1P59025 263 aa6.94□□□□□ -1.3
AP3S1-202ENST00000395548 RASA3Q14644 834 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms