RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 GNEQ9Y223 722 aaKnown RBP16.72■□□□□ 0.27
SCAF11-204ENST00000395454 N4BP3O15049 544 aa16.71■□□□□ 0.27
SCAF11-204ENST00000395454 NKRFO15226 690 aaKnown RBP eCLIP16.71■□□□□ 0.27
SCAF11-204ENST00000395454 STX10O60499 249 aa16.71■□□□□ 0.27
SCAF11-204ENST00000395454 GH1P01241 217 aa16.71■□□□□ 0.27
SCAF11-204ENST00000395454 FAM26FQ5R3K3 315 aa16.71■□□□□ 0.27
SCAF11-204ENST00000395454 TLK2Q86UE8 772 aa16.71■□□□□ 0.27
SCAF11-204ENST00000395454 GPBP1Q86WP2 473 aa16.71■□□□□ 0.27
SCAF11-204ENST00000395454 CCDC65Q8IXS2 484 aa16.71■□□□□ 0.27
SCAF11-204ENST00000395454 SRRTQ9BXP5 876 aaKnown RBP16.71■□□□□ 0.27
SCAF11-204ENST00000395454 DNM3Q9UQ16 869 aa16.71■□□□□ 0.27
SCAF11-204ENST00000395454 SAMM50Q9Y512 469 aa16.71■□□□□ 0.27
SCAF11-204ENST00000395454 NOP56O00567 594 aaKnown RBP16.7■□□□□ 0.26
SCAF11-204ENST00000395454 ARHGAP6O43182 974 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 DYNC1LI2O43237 492 aaPredicted RBP16.7■□□□□ 0.26
SCAF11-204ENST00000395454 EYA4O95677 639 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 RARBP10826 455 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 KRT76Q01546 638 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 TRIM14Q14142 442 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 HSDL1Q3SXM5 330 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 OR6J1Q8NGC5 347 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 CCDC51Q96ER9 411 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 PRIMPOLQ96LW4 560 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 SPATA33Q96N06 139 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 UNC45AQ9H3U1 944 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 PANK4Q9NVE7 773 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 DUSP11O75319 330 aaKnown RBP16.7■□□□□ 0.26
SCAF11-204ENST00000395454 ARHGAP1Q07960 439 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 LAMC2Q13753 1193 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 MTFR1Q15390 333 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 PTPN21Q16825 1174 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 NEK9Q8TD19 979 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 UNC93B1Q9H1C4 597 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 TAB2Q9NYJ8 693 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 DDX20Q9UHI6 824 aaKnown RBP16.7■□□□□ 0.26
SCAF11-204ENST00000395454 TELO2Q9Y4R8 837 aa16.7■□□□□ 0.26
SCAF11-204ENST00000395454 USP27XA6NNY8 438 aa16.69■□□□□ 0.26
SCAF11-204ENST00000395454 CCNE2O96020 404 aa16.69■□□□□ 0.26
SCAF11-204ENST00000395454 GYPCP04921 128 aa16.69■□□□□ 0.26
SCAF11-204ENST00000395454 IDEP14735 1019 aa16.69■□□□□ 0.26
SCAF11-204ENST00000395454 PSMC6P62333 389 aa16.69■□□□□ 0.26
SCAF11-204ENST00000395454 LRRC55Q6ZSA7 311 aa16.69■□□□□ 0.26
SCAF11-204ENST00000395454 ZC3H3Q8IXZ2 948 aaKnown RBP16.69■□□□□ 0.26
SCAF11-204ENST00000395454 MYOCDQ8IZQ8 938 aa16.69■□□□□ 0.26
SCAF11-204ENST00000395454 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.69■□□□□ 0.261e-8■□□□□ 9.5
SCAF11-204ENST00000395454 AKR1B15C9JRZ8 316 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 MFAP3LO75121 409 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 SLITRK3O94933 977 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 ACTR2P61160 394 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 GIT2Q14161 759 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 ZNF746Q6NUN9 644 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 AFG1LQ8WV93 481 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 EMID1Q96A84 441 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 CNOT6LQ96LI5 555 aaKnown RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 BAG1Q99933 345 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 NAA15Q9BXJ9 866 aaKnown RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 AP5M1Q9H0R1 490 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 RNF208Q9H0X6 261 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 MAGEC2Q9UBF1 373 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 WDR64B1ANS9 1081 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 MSCO60682 206 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 PGK1P00558 417 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 MYCNP04198 464 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 C6orf222P0C671 652 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 EPHA7Q15375 998 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 MIER3Q7Z3K6 550 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 CNGA4Q8IV77 575 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 SMAP1Q8IYB5 467 aaPredicted RBP16.68■□□□□ 0.26
SCAF11-204ENST00000395454 PPTC7Q8NI37 304 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 ZNF333Q96JL9 665 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 MCOLN1Q9GZU1 580 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 VPS16Q9H269 839 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 XPNPEP3Q9NQH7 507 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 Q9Y3F1 56 aa16.68■□□□□ 0.26
SCAF11-204ENST00000395454 CCP110O43303 1012 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 FGFR1OPO95684 399 aaKnown RBP16.67■□□□□ 0.26
SCAF11-204ENST00000395454 CCL5P13501 91 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 SFNP31947 248 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 DNM2P50570 870 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 IRX5P78411 483 aaPredicted RBP16.67■□□□□ 0.26
SCAF11-204ENST00000395454 RBL2Q08999 1139 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 MIIPQ5JXC2 388 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 EPM2AIP1Q7L775 607 aaPredicted RBP16.67■□□□□ 0.26
SCAF11-204ENST00000395454 PPFIBP1Q86W92 1011 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 GLIS3Q8NEA6 775 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 GPR20Q99678 358 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 TUBGCP2Q9BSJ2 902 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 SPC25Q9HBM1 224 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 KCND2Q9NZV8 630 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 R3HCC1Q9Y3T6 440 aaKnown RBP16.67■□□□□ 0.26
SCAF11-204ENST00000395454 PCDHA10Q9Y5I2 948 aa16.67■□□□□ 0.26
SCAF11-204ENST00000395454 KIF2AO00139 706 aaPredicted RBP16.66■□□□□ 0.26
SCAF11-204ENST00000395454 KIF20AO95235 890 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 SSBP05455 408 aaKnown RBP eCLIP16.66■□□□□ 0.26
SCAF11-204ENST00000395454 TCF7P36402 384 aaPredicted RBP16.66■□□□□ 0.26
SCAF11-204ENST00000395454 JAK3P52333 1124 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 ADKP55263 362 aaKnown RBP16.66■□□□□ 0.26
SCAF11-204ENST00000395454 BMT2Q1RMZ1 405 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 DNTTIP2Q5QJE6 756 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms