RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 CCDC148Q8NFR7 591 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 RASGRP4Q8TDF6 673 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 ATP8B4Q8TF62 1192 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 ZNF577Q9BSK1 485 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 IRF2BPLQ9H1B7 796 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 AGO3Q9H9G7 860 aaKnown RBP15.35■□□□□ 0.05
SCAF11-203ENST00000395453 VPS54Q9P1Q0 977 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 TTC3P53804 2025 aa15.35■□□□□ 0.05
SCAF11-203ENST00000395453 KDM3AQ9Y4C1 1321 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 PTPRZ1P23471 2315 aaPredicted RBP15.34■□□□□ 0.05
SCAF11-203ENST00000395453 ZBTB42B2RXF5 422 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 GFRA3O60609 400 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 NEFLP07196 543 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 USP11P51784 963 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 TCF15Q12870 199 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 FAM160B1Q5W0V3 765 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 SWSAP1Q6NVH7 229 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 MIS18BP1Q6P0N0 1132 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 CRIPAKQ8N1N5 446 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 FBXL6Q8N531 539 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 PPP2R3CQ969Q6 453 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 FAM49AQ9H0Q0 323 aaPredicted RBP15.34■□□□□ 0.05
SCAF11-203ENST00000395453 IGFLR1Q9H665 355 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 ZNF302Q9NR11 478 aa15.34■□□□□ 0.05
SCAF11-203ENST00000395453 MAFBQ9Y5Q3 323 aaPredicted RBP15.34■□□□□ 0.05
SCAF11-203ENST00000395453 LOXHD1Q8IVV2 1947 aa15.33■□□□□ 0.05
SCAF11-203ENST00000395453 MYH9P35579 1960 aaKnown RBP15.33■□□□□ 0.04
SCAF11-203ENST00000395453 COL1A2P08123 1366 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 BACH1O14867 736 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 EYA4O95677 639 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 KLRC1P26715 233 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 CD52P31358 61 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 NDUFV1P49821 464 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 ZXDAP98168 799 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 SSRP1Q08945 709 aaKnown RBP15.33■□□□□ 0.04
SCAF11-203ENST00000395453 ADAM15Q13444 863 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 PRR16Q569H4 304 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 ZNF484Q5JVG2 852 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 PDXDC2PQ6P474 469 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 RTN4RL1Q86UN2 441 aaPredicted RBP15.33■□□□□ 0.04
SCAF11-203ENST00000395453 SMAP1Q8IYB5 467 aaPredicted RBP15.33■□□□□ 0.04
SCAF11-203ENST00000395453 KIAA0319LQ8IZA0 1049 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 FAM177A1Q8N128 213 aaPredicted RBP15.33■□□□□ 0.04
SCAF11-203ENST00000395453 CLP1Q92989 425 aaKnown RBP15.33■□□□□ 0.04
SCAF11-203ENST00000395453 CELF4Q9BZC1 486 aaKnown RBP15.33■□□□□ 0.04
SCAF11-203ENST00000395453 RC3H2Q9HBD1 1191 aaKnown RBP15.33■□□□□ 0.04
SCAF11-203ENST00000395453 TRPV2Q9Y5S1 764 aa15.33■□□□□ 0.04
SCAF11-203ENST00000395453 ADGRA3Q8IWK6 1321 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 IGSF9BQ9UPX0 1349 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 WDR81Q562E7 1941 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 M0R2N6 131 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 LINC01565O15544 149 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 MMP1P03956 469 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 LINC00271P0C7V0 271 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 GTF2F1P35269 517 aaKnown RBP eCLIP15.32■□□□□ 0.04
SCAF11-203ENST00000395453 KRT76Q01546 638 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 ERICH6BQ5W0A0 696 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 FAM43BQ6ZT52 329 aaPredicted RBP15.32■□□□□ 0.04
SCAF11-203ENST00000395453 TRIM22Q8IYM9 498 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 LINC01599Q8WXQ3 324 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 ZNF689Q96CS4 500 aaPredicted RBP15.32■□□□□ 0.04
SCAF11-203ENST00000395453 MSLNLQ96KJ4 702 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 LARP6Q9BRS8 491 aaKnown RBP15.32■□□□□ 0.04
SCAF11-203ENST00000395453 PLVAPQ9BX97 442 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 FTHL17Q9BXU8 183 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 PPP4R2Q9NY27 417 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 PADI3Q9ULW8 664 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 PCDHA10Q9Y5I2 948 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 EVPLQ92817 2033 aa15.32■□□□□ 0.04
SCAF11-203ENST00000395453 LOC730098B7Z3J9 87 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 M0QZ92 97 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 MSH4O15457 936 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 DEXIO95424 95 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 PSAPP07602 524 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 NLRP5P59047 1200 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 TMEM62Q0P6H9 643 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 NPY5RQ15761 445 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 BBXQ8WY36 941 aaPredicted RBP15.31■□□□□ 0.04
SCAF11-203ENST00000395453 RIT2Q99578 217 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 PDRG1Q9NUG6 133 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 PCDHA4Q9UN74 947 aa15.31■□□□□ 0.04
SCAF11-203ENST00000395453 SPTBN4Q9H254 2564 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 ATG2AQ2TAZ0 1938 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 CYP3A7-CYP3A51PA0A087WV96 503 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 CPLX1O14810 134 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 DGKIO75912 1065 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 CYP3A7P24462 503 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 BTG3Q14201 252 aaPredicted RBP15.3■□□□□ 0.04
SCAF11-203ENST00000395453 CBX2Q14781 532 aaPredicted RBP15.3■□□□□ 0.04
SCAF11-203ENST00000395453 DAGLBQ8NCG7 672 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 SMRP1Q8NCR6 262 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 TBCKQ8TEA7 893 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 SLC5A5Q92911 643 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 C22orf23Q9BZE7 217 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 CDHR5Q9HBB8 845 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 FAM86C1Q9NVL1 165 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 PLAGL2Q9UPG8 496 aa15.3■□□□□ 0.04
SCAF11-203ENST00000395453 CSPG5O95196 566 aa15.29■□□□□ 0.04
SCAF11-203ENST00000395453 C22orf31O95567 290 aa15.29■□□□□ 0.04
SCAF11-203ENST00000395453 SIGLEC14Q08ET2 396 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms