RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 PCDHB12Q9Y5F1 795 aa4.65□□□□□ -1.66
HERC4-204ENST00000395198 USP19O94966 1318 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 TMEM221A6NGB7 291 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 APOA4P06727 396 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 CD46P15529 392 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 EVI2BP34910 448 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 AP3M2P53677 418 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 TRPC3Q13507 836 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 CUL2Q13617 745 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 LASP1Q14847 261 aaKnown RBP4.65□□□□□ -1.67
HERC4-204ENST00000395198 FOXB2Q5VYV0 432 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 MRM1Q6IN84 353 aaKnown RBP4.65□□□□□ -1.67
HERC4-204ENST00000395198 C4orf50Q6ZRC1 276 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 C7orf31Q8N865 590 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 TRIM58Q8NG06 486 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 RASSF8Q8NHQ8 419 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 NOC3LQ8WTT2 800 aaKnown RBP4.65□□□□□ -1.67
HERC4-204ENST00000395198 SDCCAG3Q96C92 435 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 ZDHHC15Q96MV8 337 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 SDF4Q9BRK5 362 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 GHITMQ9H3K2 345 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.65□□□□□ -1.67
HERC4-204ENST00000395198 TEKT2Q9UIF3 430 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 MRPL11Q9Y3B7 192 aaKnown RBP4.65□□□□□ -1.67
HERC4-204ENST00000395198 ASB3Q9Y575 518 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 CUL7Q14999 1698 aa4.65□□□□□ -1.67
HERC4-204ENST00000395198 A0A1W2PPH5 198 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 DDHD2O94830 711 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 GJB6O95452 261 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 IARSP41252 1262 aaKnown RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 KCNJ6P48051 423 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 DIO1P49895 249 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 GUCA2AQ02747 115 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 GABPB1Q06547 395 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 ORC1Q13415 861 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 RBBP5Q15291 538 aaKnown RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 AADACL4Q5VUY2 407 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 SEPT14Q6ZU15 432 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 CHST15Q7LFX5 561 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 PHTF2Q8N3S3 785 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PCSK9Q8NBP7 692 aaKnown RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 ANKRD20A12PQ8NF67 263 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 VCPIP1Q96JH7 1222 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TBCBQ99426 244 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 BCL7BQ9BQE9 202 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 AASSQ9UDR5 926 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 EXOC7Q9UPT5 735 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 MAPRE3Q9UPY8 281 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PCDHGB6Q9Y5F9 930 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TTC41PQ6P2S7 1318 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 KIF13AQ9H1H9 1805 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 NUP155O75694 1391 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PRG4Q92954 1404 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 IFT140Q96RY7 1462 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 URB2Q14146 1524 aaKnown RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 ATXN7O15265 892 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 OFD1O75665 1012 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 NEBLO76041 1014 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PDHA1P08559 390 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 UBL4AP11441 157 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 HPGDP15428 266 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 FXR1P51114 621 aaKnown RBP eCLIP4.64□□□□□ -1.67
HERC4-204ENST00000395198 IKQ13123 557 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 STK11Q15831 433 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PDZD4Q76G19 769 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 CCDC83Q8IWF9 413 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PLD6Q8N2A8 252 aaKnown RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 PPP1R13BQ96KQ4 1090 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 EMILIN2Q9BXX0 1053 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TRPM5Q9NZQ8 1165 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 ZSWIM5Q9P217 1185 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 WDR37Q9Y2I8 494 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 MRFAP1Q9Y605 127 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 CCDC169A6NNP5 214 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 KRIT1O00522 736 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 URI1O94763 535 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 SLITRK3O94933 977 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 CAMTA2O94983 1202 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 HEXBP07686 556 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 ATP5F1P24539 256 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 NOS3P29474 1203 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 HOXA11P31270 313 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 INHBCP55103 352 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 ARPC4P59998 168 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TMPRSS15P98073 1019 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 EXOSC9Q06265 439 aaKnown RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 LAMB3Q13751 1172 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 ZCCHC12Q6PEW1 402 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TRAF7Q6Q0C0 670 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 ATCAYQ86WG3 371 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TTC13Q8NBP0 860 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 CTNNBL1Q8WYA6 563 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 EZH1Q92800 747 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 TTC17Q96AE7 1141 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 LENG8Q96PV6 779 aaPredicted RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 RIOK1Q9BRS2 568 aaKnown RBP4.64□□□□□ -1.67
HERC4-204ENST00000395198 ACAT2Q9BWD1 397 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TRPV6Q9H1D0 765 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 PDE11AQ9HCR9 933 aa4.64□□□□□ -1.67
HERC4-204ENST00000395198 TCF7L1Q9HCS4 588 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms