RNA–Protein interactions for RNA: ENST00000394961.6

SMARCAD1-203, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

TSL 2

Gene SMARCAD1, Length 3,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-203ENST00000394961 CD52P31358 61 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 PTPN5P54829 565 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 NAPAP54920 295 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 ANKRD54Q6NXT1 300 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 NFXL1Q6ZNB6 911 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 FAM228AQ86W67 206 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 PPM1EQ8WY54 764 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 CCDC51Q96ER9 411 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZNF274Q96GC6 653 aaPredicted RBP7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 NFKBIZQ9BYH8 718 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 CERS4Q9HA82 394 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 CNTNAP2Q9UHC6 1331 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 DNAH12Q6ZR08 3092 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 SPTBN5Q9NRC6 3674 aaKnown RBP7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 WDR64B1ANS9 1081 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 FAM86B1E9PN63 330 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 PSMD10O75832 226 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 FAM86B2P0C5J1 330 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 ITIH3Q06033 890 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 UBE2SQ16763 222 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 CCDC60Q8IWA6 550 aaPredicted RBP7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 UBALD2Q8IYN6 164 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 RNF168Q8IYW5 571 aaPredicted RBP7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 CASP10Q92851 521 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 TLR9Q9NR96 1032 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 USTQ9Y2C2 406 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 PCDHB7Q9Y5E2 793 aa7.07□□□□□ -1.28
SMARCAD1-203ENST00000394961 IPO5O00410 1097 aaKnown RBP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 DKC1O60832 514 aaKnown RBP eCLIP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 KLRC1P26715 233 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 IRS1P35568 1242 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 SIGLEC14Q08ET2 396 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 PPP2R5CQ13362 524 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 TMCO2Q7Z6W1 182 aaPredicted RBP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 SLC39A11Q8N1S5 342 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 GLG1Q92896 1179 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 NOC2LQ9Y3T9 749 aaKnown RBP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 A0A0U1RQF3 1178 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 MGEA5O60502 916 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 LYPLA2O95372 231 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 OATP04181 439 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 GCFC2P16383 781 aaKnown RBP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 KCNA5P22460 613 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 RPS6KB1P23443 525 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 RTL10Q7L3V2 364 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 HEATR3Q7Z4Q2 680 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 PLA2G4DQ86XP0 818 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 ECHDC2Q86YB7 292 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 SLC22A17Q8WUG5 538 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 ASIC4Q96FT7 647 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 NR2E1Q9Y466 385 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 GOLGA8AA7E2F4 631 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 GOLGA8BA8MQT2 603 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 EIF5BO60841 1220 aaKnown RBP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 DARSP14868 501 aaKnown RBP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 PSMA5P28066 241 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 CDC27P30260 824 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 GPC3P51654 580 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 ORC2Q13416 577 aaPredicted RBP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 SKIV2LQ15477 1246 aaKnown RBP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 PPP4R3AQ6IN85 833 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 REXO1Q8N1G1 1221 aaKnown RBP7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 KLHL23Q8NBE8 558 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZSWIM6Q9HCJ5 1215 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 NRBP2Q9NSY0 501 aa7.06□□□□□ -1.28
SMARCAD1-203ENST00000394961 RPS6KA5O75582 802 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 CTSHP09668 335 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 SMC1AQ14683 1233 aaKnown RBP7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 PTPN21Q16825 1174 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 TRIM67Q6ZTA4 783 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 DDX53Q86TM3 631 aaKnown RBP7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 RNF135Q8IUD6 432 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 CNNM3Q8NE01 707 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 ETNPPLQ8TBG4 499 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 PPP1R13LQ8WUF5 828 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 POF1BQ8WVV4 589 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 KCNN1Q92952 543 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 CHMP4CQ96CF2 233 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 INO80BQ9C086 356 aaPredicted RBP7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 BCL11AQ9H165 835 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 ATP6V0A4Q9HBG4 840 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 DACT1Q9NYF0 836 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 ST3GAL5Q9UNP4 418 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 COL6A3P12111 3177 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 PRRC2BQ5JSZ5 2229 aaKnown RBP7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 MAFO75444 373 aaPredicted RBP7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 AXLP30530 894 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 MTHFRP42898 656 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 TPRNQ4KMQ1 711 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 KIAA1841Q6NSI8 718 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 PPFIBP1Q86W92 1011 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 MYL10Q9BUA6 226 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 ZBP1Q9H171 429 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 UBN1Q9NPG3 1134 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 TRPC6Q9Y210 931 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 LILRB3O75022 631 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 TMOD1P28289 359 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 RFC5P40937 340 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 XKR3Q5GH77 459 aa7.05□□□□□ -1.28
SMARCAD1-203ENST00000394961 VN1R2Q8NFZ6 395 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms