RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 SOS2Q07890 1332 aaPredicted RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 E9PMD0 336 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 CASP1P29466 404 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 ACAD11Q709F0 780 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 ADCK2Q7Z695 626 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 PCF11O94913 1555 aaKnown RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 SPDYE5A6NIY4 337 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 SPDYE7PQ495Y7 208 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 SPDYAQ5MJ70 313 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 TEX9Q8N6V9 391 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 KIFC3Q9BVG8 833 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 PUS3Q9BZE2 481 aaKnown RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 SIK2Q9H0K1 926 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 GIMAP4Q9NUV9 329 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 CACNA2D2Q9NY47 1150 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 C6orf203Q9P0P8 240 aaPredicted RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 PRKAB2O43741 272 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 ADORA2BP29275 332 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 RECQLP46063 649 aaPredicted RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 ARL13BQ3SXY8 428 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 RNF25Q96BH1 459 aaPredicted RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 SRPK1Q96SB4 655 aaKnown RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 PIDD1Q9HB75 910 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 TRPC7Q9HCX4 862 aa13.09□□□□□ -0.31
SIN3A-202ENST00000394947 TLR7Q9NYK1 1049 aaKnown RBP13.09□□□□□ -0.31
SIN3A-202ENST00000394947 TRPC1P48995 793 aa13.08□□□□□ -0.31
SIN3A-202ENST00000394947 CEP78Q5JTW2 689 aa13.08□□□□□ -0.31
SIN3A-202ENST00000394947 KRT26Q7Z3Y9 468 aa13.08□□□□□ -0.31
SIN3A-202ENST00000394947 DNAJC7Q99615 494 aa13.08□□□□□ -0.31
SIN3A-202ENST00000394947 DSCC1Q9BVC3 393 aa13.08□□□□□ -0.31
SIN3A-202ENST00000394947 MED23Q9ULK4 1368 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 DPYSL4O14531 572 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 NCK2O43639 380 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 PHKA1P46020 1223 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 TNFAIP1Q13829 316 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 MORF4L2Q15014 288 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 NEURL1BA8MQ27 555 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 TSC22D2O75157 780 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 PALMO75781 387 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 KIAA1755Q5JYT7 1200 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 HPCAL4Q9UM19 191 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 PCDHA4Q9UN74 947 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 MAP3K19Q56UN5 1328 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 ASMTLO95671 621 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 KCNA2P16389 499 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 TCN1P20061 433 aaPredicted RBP13.08□□□□□ -0.32
SIN3A-202ENST00000394947 BPIFB4P59827 614 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 MDM2Q00987 491 aaPredicted RBP13.08□□□□□ -0.32
SIN3A-202ENST00000394947 CUL3Q13618 768 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 PDXDC2PQ6P474 469 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 PATL1Q86TB9 770 aaKnown RBP13.08□□□□□ -0.32
SIN3A-202ENST00000394947 PPM1NQ8N819 430 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 BTBD6Q96KE9 485 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 NACC1Q96RE7 527 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 GREM2Q9H772 168 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 ANAPC7Q9UJX3 599 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 ATP9BO43861 1147 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 SLC9A1P19634 815 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 DCAF15Q66K64 600 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 OLFML2BQ68BL8 750 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 UNC45AQ9H3U1 944 aa13.08□□□□□ -0.32
SIN3A-202ENST00000394947 PPEF1O14829 653 aaPredicted RBP13.07□□□□□ -0.32
SIN3A-202ENST00000394947 FASTKD1Q53R41 847 aaKnown RBP13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ICA1LQ8NDH6 482 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 DTX3LQ8TDB6 740 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ORAI2Q96SN7 254 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 USP17L3A6NCW0 530 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 USP17L4A6NCW7 530 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ZNF233A6NK53 670 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 AGRPO00253 132 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 PDIA3P30101 505 aaKnown RBP13.07□□□□□ -0.32
SIN3A-202ENST00000394947 USP17L1Q7RTZ2 530 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ANKMY2Q8IV38 441 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 CYGBQ8WWM9 190 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 H0YCG3 227 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 DDHD2O94830 711 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 IRF1P10914 325 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 LCP1P13796 627 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 DHX38Q92620 1227 aaKnown RBP13.07□□□□□ -0.32
SIN3A-202ENST00000394947 PHF21AQ96BD5 680 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ASIC4Q96FT7 647 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 SPON2Q9BUD6 331 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 SEL1LQ9UBV2 794 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 CMA1P23946 247 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 GFPT1Q06210 699 aaPredicted RBP13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ADCK5Q3MIX3 580 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ZNF746Q6NUN9 644 aaPredicted RBP13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ADCK1Q86TW2 530 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ATF5Q9Y2D1 282 aaPredicted RBP13.07□□□□□ -0.32
SIN3A-202ENST00000394947 CFAP65Q6ZU64 1925 aaKnown RBP13.07□□□□□ -0.32
SIN3A-202ENST00000394947 TRPM2O94759 1503 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 GYS1P13807 737 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 COPB2P35606 906 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ARMC2Q8NEN0 867 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 CNKSR1Q969H4 720 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 MRPL47Q9HD33 250 aaKnown RBP13.07□□□□□ -0.32
SIN3A-202ENST00000394947 ABCC4O15439 1325 aa13.07□□□□□ -0.32
SIN3A-202ENST00000394947 FMNL1O95466 1100 aaPredicted RBP13.06□□□□□ -0.32
SIN3A-202ENST00000394947 BRD1O95696 1058 aa13.06□□□□□ -0.32
SIN3A-202ENST00000394947 PRAMEP78395 509 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms