RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 MIER3Q7Z3K6 550 aa20.38■□□□□ 0.85
SIL1-202ENST00000394817 APOBEC3FQ8IUX4 373 aaKnown RBP20.38■□□□□ 0.85
SIL1-202ENST00000394817 CAGE1Q8TC20 777 aa20.38■□□□□ 0.85
SIL1-202ENST00000394817 NOX5Q96PH1 765 aa20.38■□□□□ 0.85
SIL1-202ENST00000394817 PPP1R9AQ9ULJ8 1098 aa20.38■□□□□ 0.85
SIL1-202ENST00000394817 PDE2AO00408 941 aaPredicted RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 TCP1P17987 556 aaKnown RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 VCAM1P19320 739 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 MAPK7Q13164 816 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 ODR4Q5SWX8 454 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 HS2ST1Q7LGA3 356 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 FAM186BQ8IYM0 893 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 CPXCR1Q8N123 301 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 SYTL5Q8TDW5 730 aaPredicted RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 STRA6Q9BX79 667 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 RAVER2Q9HCJ3 691 aaKnown RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 AGO4Q9HCK5 861 aaKnown RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 SIX2Q9NPC8 291 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 RNF181Q9P0P0 153 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 PNMA2Q9UL42 364 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 PCDHB13Q9Y5F0 798 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 BZW2Q9Y6E2 419 aaKnown RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 PHIPQ8WWQ0 1821 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 A0A087X0T9 212 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 TARSL2A2RTX5 802 aaKnown RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 DDX39AO00148 427 aaKnown RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 PPP1R12BO60237 982 aaPredicted RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 PPP1R37O75864 691 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 FLOT1O75955 427 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 P4HBP07237 508 aaKnown RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 FAM228BP0C875 321 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 MRPS9P82933 396 aaKnown RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 ITIH3Q06033 890 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 MUM1L1Q5H9M0 696 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 IRF2BP2Q7Z5L9 587 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 CREG2Q8IUH2 290 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 DAW1Q8N136 415 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 MSL3Q8N5Y2 521 aaKnown RBP20.37■□□□□ 0.85
SIL1-202ENST00000394817 SPAG5Q96R06 1193 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 ABCB6Q9NP58 842 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 DMAC2Q9NW81 257 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 GCNT4Q9P109 453 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 L1RE1Q9UN81 338 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 HYOU1Q9Y4L1 999 aa20.37■□□□□ 0.85
SIL1-202ENST00000394817 PRKCIP41743 596 aa20.36■□□□□ 0.85
SIL1-202ENST00000394817 ARID5AQ03989 594 aa20.36■□□□□ 0.85
SIL1-202ENST00000394817 ITGB3BPQ13352 177 aaPredicted RBP20.36■□□□□ 0.85
SIL1-202ENST00000394817 MTMR2Q13614 643 aa20.36■□□□□ 0.85
SIL1-202ENST00000394817 IKZF4Q9H2S9 585 aa20.36■□□□□ 0.85
SIL1-202ENST00000394817 SSC5DA1L4H1 1573 aa20.36■□□□□ 0.85
SIL1-202ENST00000394817 HIP1RO75146 1068 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 MCM3P25205 808 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 JAM2P57087 298 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 TERF2Q15554 542 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 NAB2Q15742 525 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 ANKRD13CQ8N6S4 541 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 GOLGA5Q8TBA6 731 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 ZKSCAN4Q969J2 545 aaPredicted RBP20.35■□□□□ 0.85
SIL1-202ENST00000394817 DRC1Q96MC2 740 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 OSBPL9Q96SU4 736 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 AGPAT3Q9NRZ7 376 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 TSKSQ9UJT2 592 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 DBR1Q9UK59 544 aaKnown RBP20.35■□□□□ 0.85
SIL1-202ENST00000394817 FDX1P10109 184 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 ANXA13P27216 316 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 RPS6P62753 249 aaKnown RBP20.35■□□□□ 0.85
SIL1-202ENST00000394817 MTMR1Q13613 665 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 COG2Q14746 738 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 C10orf76Q5T2E6 689 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 DCAF15Q66K64 600 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 PADI6Q6TGC4 694 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 HDXQ7Z353 690 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 HOMER2Q9NSB8 354 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 PKD2L1Q9P0L9 805 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 ADAMTS1Q9UHI8 967 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 ZHX2Q9Y6X8 837 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 KIAA1217Q5T5P2 1943 aa20.35■□□□□ 0.85
SIL1-202ENST00000394817 ATP8B3O60423 1300 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 LYPLA2O95372 231 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 FAM193AP78312 1265 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 PTK2Q05397 1052 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 SMC1AQ14683 1233 aaKnown RBP20.34■□□□□ 0.85
SIL1-202ENST00000394817 PGM5Q15124 567 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 DLK2Q6UY11 383 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 SLC9A9Q8IVB4 645 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 KSR1Q8IVT5 923 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 RBM46Q8TBY0 533 aaKnown RBP20.34■□□□□ 0.85
SIL1-202ENST00000394817 COG1Q8WTW3 980 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 WRNIP1Q96S55 665 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.34■□□□□ 0.85
SIL1-202ENST00000394817 TLR10Q9BXR5 811 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 RPAP3Q9H6T3 665 aaPredicted RBP20.34■□□□□ 0.85
SIL1-202ENST00000394817 TBC1D22BQ9NU19 505 aa20.34■□□□□ 0.85
SIL1-202ENST00000394817 BTNL10A8MVZ5 291 aa20.33■□□□□ 0.85
SIL1-202ENST00000394817 BUB1O43683 1085 aa20.33■□□□□ 0.85
SIL1-202ENST00000394817 MAPTP10636 758 aaKnown RBP20.33■□□□□ 0.85
SIL1-202ENST00000394817 ALCAMQ13740 583 aa20.33■□□□□ 0.85
SIL1-202ENST00000394817 PPP2R5AQ15172 486 aa20.33■□□□□ 0.85
SIL1-202ENST00000394817 NFRKBQ6P4R8 1299 aa20.33■□□□□ 0.85
SIL1-202ENST00000394817 ZNF571Q7Z3V5 609 aaPredicted RBP20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms