RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 CPA2P48052 419 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 SLC29A2Q14542 456 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 SPRED3Q2MJR0 410 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 RABL6Q3YEC7 729 aaPredicted RBP9.55□□□□□ -0.88
RTN4-206ENST00000394611 CHADLQ6NUI6 762 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 FAM43BQ6ZT52 329 aaPredicted RBP9.55□□□□□ -0.88
RTN4-206ENST00000394611 KCTD1Q719H9 257 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 SLC51AQ86UW1 340 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 KLF6Q99612 283 aaPredicted RBP9.55□□□□□ -0.88
RTN4-206ENST00000394611 THAP9Q9H5L6 903 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 PCDHA12Q9UN75 941 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 ANKRD31Q8N7Z5 1873 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 MYH3P11055 1940 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 LAMB2P55268 1798 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 TARSL2A2RTX5 802 aaKnown RBP9.55□□□□□ -0.88
RTN4-206ENST00000394611 CSF1RP07333 972 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 STAT1P42224 750 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 SARSP49591 514 aaKnown RBP9.55□□□□□ -0.88
RTN4-206ENST00000394611 TPH2Q8IWU9 490 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 AENQ8WTP8 325 aaKnown RBP9.55□□□□□ -0.88
RTN4-206ENST00000394611 MTRQ99707 1265 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 AGXT2Q9BYV1 514 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 TRIM7Q9C029 511 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 OSGEPQ9NPF4 335 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 NRXN2Q9P2S2 1712 aa9.55□□□□□ -0.88
RTN4-206ENST00000394611 COL4A1P02462 1669 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 A0A0G2JND7 137 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 POTEB3A0JP26 581 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 POTECB2RU33 542 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 SUN1O94901 812 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 TMEM132AQ24JP5 1023 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 POTEBQ6S5H4 581 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 SGMS1Q86VZ5 419 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 KIAA0825Q8IV33 1275 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 PPM1KQ8N3J5 372 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 PIGOQ8TEQ8 1089 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 WHAMMQ8TF30 809 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 LMBR1Q8WVP7 490 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 C9orf72Q96LT7 481 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 SPON1Q9HCB6 807 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 PCDHA4Q9UN74 947 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 COL4A3BPQ9Y5P4 624 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 EXOC3O60645 756 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 ATF7P17544 494 aaPredicted RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 TARSP26639 723 aaKnown RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 PAPD7Q5XG87 772 aaKnown RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 DHTKD1Q96HY7 919 aaPredicted RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 KLHL11Q9NVR0 708 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.54□□□□□ -0.882e-17■■□□□ 11.9
RTN4-206ENST00000394611 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 PRPF3O43395 683 aaKnown RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 TAL1P17542 331 aaPredicted RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 KCNH2Q12809 1159 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 MTMR3Q13615 1198 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 HHATQ5VTY9 493 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 SUGP1Q8IWZ8 645 aaKnown RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 ZNF579Q8NAF0 562 aaKnown RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 CFAP61Q8NHU2 1237 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 PPP1R14CQ8TAE6 165 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 BTBD6Q96KE9 485 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 BRIP1Q9BX63 1249 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 ACTR5Q9H9F9 607 aaPredicted RBP9.54□□□□□ -0.88
RTN4-206ENST00000394611 UTRNP46939 3433 aa9.54□□□□□ -0.88
RTN4-206ENST00000394611 POTEFA5A3E0 1075 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 MYMKA6NI61 221 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 POTEIP0CG38 1075 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 EPB41P11171 864 aaKnown RBP9.53□□□□□ -0.88
RTN4-206ENST00000394611 PTK2Q05397 1052 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 USP17L6PQ6QN14 398 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 POTEGQ6S5H5 508 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 POTEEQ6S8J3 1075 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 ZNF365Q70YC5 407 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 CUL5Q93034 780 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 XPO6Q96QU8 1125 aaKnown RBP9.53□□□□□ -0.88
RTN4-206ENST00000394611 MKNK1Q9BUB5 465 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 DLGAP2Q9P1A6 1054 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 HDAC9Q9UKV0 1011 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 CCDC169A6NNP5 214 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 UBTFL6P0CB48 400 aaPredicted RBP9.53□□□□□ -0.88
RTN4-206ENST00000394611 ZCCHC18P0CG32 403 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 DLATP10515 647 aaKnown RBP9.53□□□□□ -0.88
RTN4-206ENST00000394611 GBP1P32455 592 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 FKBP3Q00688 224 aaKnown RBP9.53□□□□□ -0.88
RTN4-206ENST00000394611 PDE1CQ14123 709 aaPredicted RBP9.53□□□□□ -0.88
RTN4-206ENST00000394611 TSNAXIP1Q2TAA8 658 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 ANKRD20A8PQ5CZ79 823 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 KLHDC7AQ5VTJ3 777 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 C4orf33Q8N1A6 199 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 GBP5Q96PP8 586 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 PHF20Q9BVI0 1012 aa9.53□□□□□ -0.88
RTN4-206ENST00000394611 RAB17Q9H0T7 212 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms