RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 CATSPER3Q86XQ3 398 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 RIT2Q99578 217 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 CALCOCO1Q9P1Z2 691 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 ASB14A6NK59 587 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 PDXKO00764 312 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 SNAPC2Q13487 334 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 SURF1Q15526 300 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 ZNF568Q3ZCX4 644 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 RABGGTAQ92696 567 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 KIAA1586Q9HCI6 787 aa11.52□□□□□ -0.56
MTHFD2-201ENST00000394053 MSH4O15457 936 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 ZSCAN20P17040 1043 aaPredicted RBP11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 GUCY2DQ02846 1103 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 SPDYE2Q495Y8 402 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 XKR3Q5GH77 459 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 TTLL3Q9Y4R7 772 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 MYL3P08590 195 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 SLURP2P0DP57 97 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 IRX5P78411 483 aaPredicted RBP11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 EVX2Q03828 476 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 ABI1Q8IZP0 508 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 KRT12Q99456 494 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 HPSEQ9Y251 543 aa11.52□□□□□ -0.57
MTHFD2-201ENST00000394053 CYTH3O43739 400 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 ZMYND10O75800 440 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 DGAT1O75907 488 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 KRT81Q14533 505 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 MAGOHBQ96A72 148 aaKnown RBP11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 PCDHAC2Q9Y5I4 1007 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 GAKO14976 1311 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 CHD2O14647 1828 aaKnown RBP11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 SYNJ2BP-COX16A0A087WUM0 186 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 GOLGA6CA6NDK9 693 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 ABL1P00519 1130 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 GOLGA6DP0CG33 693 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 PHKA2P46019 1235 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 NPEPPSP55786 919 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 C10orf76Q5T2E6 689 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 CCDC117Q8IWD4 279 aaPredicted RBP11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 SEPT1Q8WYJ6 367 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 GOLGA6AQ9NYA3 693 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 COX16Q9P0S2 106 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 LIMA1Q9UHB6 759 aaKnown RBP11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 ZNF148Q9UQR1 794 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 A0A1B0GTH6 734 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 A0A1W2PQC6 194 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 STK10O94804 968 aaKnown RBP11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 ADCY8P40145 1251 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 MYO1EQ12965 1108 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 TAF1CQ15572 869 aaPredicted RBP11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 KRT71Q3SY84 523 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 PLA2G4FQ68DD2 849 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 RUFY4Q6ZNE9 571 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 RNF149Q8NC42 400 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 TMEM143Q96AN5 459 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 GINM1Q9NU53 330 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 ADGRG1Q9Y653 693 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 DLG5Q8TDM6 1919 aa11.51□□□□□ -0.57
MTHFD2-201ENST00000394053 USP27XA6NNY8 438 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 MTF1Q14872 753 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 TKFCQ3LXA3 575 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 ZC2HC1CQ53FD0 456 aaPredicted RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 ZNF667Q5HYK9 610 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 GMCL1P1Q8NEA9 526 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 RSAD2Q8WXG1 361 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 ODF2LQ9ULJ1 636 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 GFPT1Q06210 699 aaPredicted RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 TRIM11Q96F44 468 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 NSRP1Q9H0G5 558 aaKnown RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 SNX25Q9H3E2 840 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 ADARB2Q9NS39 739 aaKnown RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 TNPO2O14787 897 aaKnown RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 VCAM1P19320 739 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 DRAP1Q14919 205 aaPredicted RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 CCDC14Q49A88 953 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 KRT39Q6A163 491 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 CEP128Q6ZU80 1094 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 ANKS1AQ92625 1134 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 MRPL47Q9HD33 250 aaKnown RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 NKIRAS1Q9NYS0 192 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 EMSYQ7Z589 1322 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 CCL15-CCL14A0A0B4J2E2 113 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 MAFGO15525 162 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 VEGFAP15692 232 aaPredicted RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 TAL1P17542 331 aaPredicted RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 PPP2R5DQ14738 602 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 CCL15Q16663 113 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 BSPRYQ5W0U4 402 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 CASC4Q6P4E1 433 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 KCNV1Q6PIU1 500 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 PNMA8AQ86V59 439 aaPredicted RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 TAB3Q8N5C8 712 aaPredicted RBP11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 FAM198AQ9UFP1 575 aa11.5□□□□□ -0.57
MTHFD2-201ENST00000394053 NFIBO00712 420 aa11.49□□□□□ -0.57
MTHFD2-201ENST00000394053 IVLP07476 585 aa11.49□□□□□ -0.57
MTHFD2-201ENST00000394053 MYBP10242 640 aa11.49□□□□□ -0.57
MTHFD2-201ENST00000394053 HUNKP57058 714 aa11.49□□□□□ -0.57
MTHFD2-201ENST00000394053 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
MTHFD2-201ENST00000394053 ILDR1Q86SU0 546 aaPredicted RBP11.49□□□□□ -0.57
MTHFD2-201ENST00000394053 AFAP1L1Q8TED9 768 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms