RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 TRIOO75962 3097 aa20.62■□□□□ 0.89
PDLIM7-205ENST00000393551 GRXCR2A6NFK2 248 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 C9IYK1 514 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 CPLX1O14810 134 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 GAS7O60861 476 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 STBD1O95210 358 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 MMP1P03956 469 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 OATP04181 439 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 ITGB1P05556 798 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 STAG3L1P0CL83 205 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 PRKCEQ02156 737 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 HYAL1Q12794 435 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 DSC3Q14574 896 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 CTC1Q2NKJ3 1217 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 FAM102BQ5T8I3 360 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 LRCH2Q5VUJ6 765 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 PTCRAQ6ISU1 281 aaPredicted RBP20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 EFCAB12Q6NXP0 572 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 FAM178BQ8IXR5 827 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 ETNPPLQ8TBG4 499 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 P2RX5Q93086 422 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 ADAMTS10Q9H324 1103 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 KCNJ14Q9UNX9 436 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 CEP131Q9UPN4 1083 aa20.61■□□□□ 0.89
PDLIM7-205ENST00000393551 GPR182O15218 404 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 COL9A1P20849 921 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 IBSPP21815 317 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 GTF2F1P35269 517 aaKnown RBP eCLIP20.6■□□□□ 0.894e-6■□□□□ 10.7
PDLIM7-205ENST00000393551 DLX2Q07687 328 aaPredicted RBP20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 KLHL23Q8NBE8 558 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 SPPL3Q8TCT6 385 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 FAM167AQ96KS9 214 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 CEP89Q96ST8 783 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 TEKT3Q9BXF9 490 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 GJB4Q9NTQ9 266 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 HCSTQ9UBK5 93 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 TCEAL9Q9UHQ7 104 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 TPCN1Q9ULQ1 816 aa20.6■□□□□ 0.89
PDLIM7-205ENST00000393551 MAGEB2O15479 319 aa20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 CSPG5O95196 566 aa20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 SFNP31947 248 aa20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 NLRP11P59045 1033 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 FAM189BP81408 668 aa20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 TARBP2Q15633 366 aaKnown RBP20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 SLC24A5Q71RS6 500 aa20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 ZNF668Q96K58 619 aaPredicted RBP20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 PHF20Q9BVI0 1012 aa20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 CLDND1Q9NY35 253 aa20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 PCDHB7Q9Y5E2 793 aa20.59■□□□□ 0.89
PDLIM7-205ENST00000393551 DENND3A2RUS2 1198 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 TMEM150BA6NC51 233 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 SLC37A4O43826 429 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 CTDNEP1O95476 244 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 IRS1P35568 1242 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 JAK3P52333 1124 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 DRP2Q13474 957 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 INF2Q27J81 1249 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 GALNT17Q6IS24 598 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 C22orf23Q9BZE7 217 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 C1orf112Q9NSG2 853 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 NRBP2Q9NSY0 501 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 LRFN2Q9ULH4 789 aa20.58■□□□□ 0.89
PDLIM7-205ENST00000393551 LINC01565O15544 149 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 PFKFB2O60825 505 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 GPC3P51654 580 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 NAALADL2Q58DX5 795 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 MOXD1Q6UVY6 613 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 FAM43BQ6ZT52 329 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 EP400NLQ6ZTU2 488 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 MIER3Q7Z3K6 550 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 ADGRD2Q7Z7M1 963 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 FAM177A1Q8N128 213 aaPredicted RBP20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 OXER1Q8TDS5 423 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 SH2D3AQ9BRG2 576 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 C11orf16Q9NQ32 467 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 RNF19AQ9NV58 838 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 AKT3Q9Y243 479 aa20.57■□□□□ 0.88
PDLIM7-205ENST00000393551 TBX10O75333 385 aa20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 NEFLP07196 543 aa20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 FGFR1P11362 822 aa20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 EIF4BP23588 611 aaKnown RBP20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 NONOQ15233 471 aaKnown RBP eCLIP20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 ODR4Q5SWX8 454 aa20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 CPLX2Q6PUV4 134 aaKnown RBP20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 RDM1Q8NG50 284 aa20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 MAP7D2Q96T17 732 aa20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 NIFKQ9BYG3 293 aaKnown RBP20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 PCDHGC5Q9Y5F6 944 aa20.56■□□□□ 0.88
PDLIM7-205ENST00000393551 STK36Q9NRP7 1315 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 IGKV6-21A0A0C4DH24 114 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 TBKBP1A7MCY6 615 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 EML1O00423 815 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 EARS2Q5JPH6 523 aaKnown RBP20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 KRT25Q7Z3Z0 450 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 GJD3Q8N144 294 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 POF1BQ8WVV4 589 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 C1QTNF1Q9BXJ1 281 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 SLKQ9H2G2 1235 aaPredicted RBP20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 IGFLR1Q9H665 355 aa20.55■□□□□ 0.88
PDLIM7-205ENST00000393551 CWH43Q9H720 699 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms