RNA–Protein interactions for RNA: ENST00000393409.2

PLXNA1-201, Transcript of plexin A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA1, Length 9,066 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA1-201ENST00000393409 SURF1Q15526 300 aa13.94□□□□□ -0.18
PLXNA1-201ENST00000393409 TBCKQ8TEA7 893 aa13.94□□□□□ -0.18
PLXNA1-201ENST00000393409 PDE8BO95263 885 aa13.94□□□□□ -0.18
PLXNA1-201ENST00000393409 MYBL1P10243 752 aa13.94□□□□□ -0.18
PLXNA1-201ENST00000393409 ARFIP2P53365 341 aa13.94□□□□□ -0.18
PLXNA1-201ENST00000393409 HIC1Q14526 733 aa13.94□□□□□ -0.18
PLXNA1-201ENST00000393409 KIF19Q2TAC6 998 aa13.94□□□□□ -0.18
PLXNA1-201ENST00000393409 ATP6V1E2Q96A05 226 aa13.94□□□□□ -0.18
PLXNA1-201ENST00000393409 UIMC1Q96RL1 719 aa13.94□□□□□ -0.18
PLXNA1-201ENST00000393409 LRRC53A6NM62 1247 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 COPS2P61201 443 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 PTPN21Q16825 1174 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 POTEAQ6S8J7 498 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 SPATA21Q7Z572 469 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 KCNV2Q8TDN2 545 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 ZNF473Q8WTR7 871 aaKnown RBP13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 VPS39Q96JC1 886 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 ANKRD27Q96NW4 1050 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 WDR24Q96S15 920 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 SEPT3Q9UH03 358 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 USP15Q9Y4E8 981 aaPredicted RBP13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 RASGRP2Q7LDG7 609 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 SPATA4Q8NEY3 305 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 CCDC159P0C7I6 412 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 PI4K2BQ8TCG2 481 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 TEX12Q9BXU0 123 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 ITIH6Q6UXX5 1313 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 LRRIQ4A6NIV6 560 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 DEAF1O75398 565 aaPredicted RBP13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 BAG6P46379 1132 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 DYNLT1P63172 113 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 FLOT2Q14254 428 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 FBXW10Q5XX13 1052 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 TRIM67Q6ZTA4 783 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 TEX2Q8IWB9 1127 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 BTBD6Q96KE9 485 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 FAM129AQ9BZQ8 928 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 GOLPH3LQ9H4A5 285 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 STRIP2Q9ULQ0 834 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 ANKRD65E5RJM6 399 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 PLA2G4BP0C869 781 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 LSP1P33241 339 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 GPC5P78333 572 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 ZNF496Q96IT1 587 aaPredicted RBP13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 PRMT1Q99873 361 aaKnown RBP13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 MBD5Q9P267 1494 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 GFPT1Q06210 699 aaPredicted RBP13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 BBS9Q3SYG4 887 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 DNAL1Q4LDG9 190 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 NSMFQ6X4W1 530 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 RASSF3Q86WH2 238 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 ATP11CQ8NB49 1132 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 KPNB1Q14974 876 aaKnown RBP13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 MAPRE2Q15555 327 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 CPXCR1Q8N123 301 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 TAB3Q8N5C8 712 aaPredicted RBP13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 ZBTB18Q99592 522 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 KIF20BQ96Q89 1820 aa13.93□□□□□ -0.18
PLXNA1-201ENST00000393409 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 ZNF577Q9BSK1 485 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 SLC38A10Q9HBR0 1119 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 TCP11X1B4DZS4 312 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 GSPT2Q8IYD1 628 aaKnown RBP13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 SKA2Q8WVK7 121 aaPredicted RBP13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 PDP2Q9P2J9 529 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 ARHGEF40Q8TER5 1519 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 FAM107AO95990 144 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 BRAFP15056 766 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 KCNA3P22001 575 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 GINM1Q9NU53 330 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 PIK3R2O00459 728 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 TLR3O15455 904 aaKnown RBP13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 TRPM8Q7Z2W7 1104 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 MCUQ8NE86 351 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 WWP1Q9H0M0 922 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 XPOTO43592 962 aaKnown RBP13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 GINS2Q9Y248 185 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 ZNF711Q9Y462 761 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 KCNF1Q9H3M0 494 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 KIF17Q9P2E2 1029 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 CERKLQ49MI3 558 aaPredicted RBP13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 KMT5AQ9NQR1 393 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 HDAC6Q9UBN7 1215 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 PPME1Q9Y570 386 aa13.92□□□□□ -0.18
PLXNA1-201ENST00000393409 RAP1GDS1P52306 607 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 MED21Q13503 144 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 TOB2Q14106 344 aaPredicted RBP13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 EHD2Q9NZN4 543 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 CYP4A11Q02928 519 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 ICA1Q05084 483 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 STAT4Q14765 748 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 TBC1D9BQ66K14 1250 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 PITPNM2Q9BZ72 1349 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 ZRANB2O95218 330 aaKnown RBP eCLIP13.91□□□□□ -0.183e-7■■■■■ 28.2
PLXNA1-201ENST00000393409 HP1BP3Q5SSJ5 553 aaPredicted RBP13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 LRRC47Q8N1G4 583 aaKnown RBP13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 HIPK4Q8NE63 616 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 FAF2Q96CS3 445 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 SNX12Q9UMY4 172 aa13.91□□□□□ -0.18
PLXNA1-201ENST00000393409 TBX22Q9Y458 520 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms