RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 NID2Q14112 1375 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 CHD4Q14839 1912 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 TCRBV7S2A1N4TA0A589 114 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 RASGRF2O14827 1237 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 MYBP10242 640 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 BARGINQ6ZT62 677 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 SLAIN2Q9P270 581 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 DDX25Q9UHL0 483 aaKnown RBP17.72■□□□□ 0.43
PHTF1-205ENST00000393357 ANKRD63C9JTQ0 380 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 CHMP2AO43633 222 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 CYP2J2P51589 502 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 DRP2Q13474 957 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 GRM4Q14833 912 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 KCTD1Q719H9 257 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 VPS36Q86VN1 386 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 ZNF34Q8IZ26 560 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 TAB3Q8N5C8 712 aaPredicted RBP17.72■□□□□ 0.43
PHTF1-205ENST00000393357 ARMC2Q8NEN0 867 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 KRT35Q92764 455 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 PBKQ96KB5 322 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 CARD10Q9BWT7 1032 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 INTUQ9ULD6 942 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 ZMYND8Q9ULU4 1186 aaPredicted RBP17.72■□□□□ 0.43
PHTF1-205ENST00000393357 MYH7BA7E2Y1 1941 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 PKD1L3Q7Z443 1732 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 PCNTO95613 3336 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 DDX3XO00571 662 aaKnown RBP eCLIP17.72■□□□□ 0.437e-6■■■□□ 14.6
PHTF1-205ENST00000393357 PLA2G4BP0C869 781 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 NQO1P15559 274 aaKnown RBP17.72■□□□□ 0.43
PHTF1-205ENST00000393357 IRF2BP2Q7Z5L9 587 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 PRUNE1Q86TP1 453 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 RAB34Q9BZG1 259 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 THAP2Q9H0W7 228 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 CUEDC2Q9H467 287 aa17.72■□□□□ 0.43
PHTF1-205ENST00000393357 GNAQP50148 359 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 MRPL12P52815 198 aaKnown RBP17.71■□□□□ 0.43
PHTF1-205ENST00000393357 FAM182AQ5T1J6 154 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 JAMLQ86YT9 394 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 ALG3Q92685 438 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 SAAL1Q96ER3 474 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 KCNQ5Q9NR82 932 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 M0R2N6 131 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 RFC4P35249 363 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 CRKLP46109 303 aaKnown RBP17.71■□□□□ 0.43
PHTF1-205ENST00000393357 TLDC1Q6P9B6 456 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 SFR1Q86XK3 245 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 VSIG1Q86XK7 387 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 CCDC65Q8IXS2 484 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 KDM4CQ9H3R0 1056 aa17.71■□□□□ 0.43
PHTF1-205ENST00000393357 SPATS2LQ9NUQ6 558 aaKnown RBP17.71■□□□□ 0.43
PHTF1-205ENST00000393357 TMEM120BA0PK00 339 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 SPAG7O75391 227 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 PON1P27169 355 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 RBM26Q5T8P6 1007 aaKnown RBP17.7■□□□□ 0.42
PHTF1-205ENST00000393357 SRRM1Q8IYB3 904 aaKnown RBP17.7■□□□□ 0.42
PHTF1-205ENST00000393357 C1orf54Q8WWF1 131 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 USP40Q9NVE5 1235 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 SCN11AQ9UI33 1791 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 GSTTP1A0A1W2PQM5 241 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 AKAP3O75969 853 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 TARSP26639 723 aaKnown RBP17.7■□□□□ 0.42
PHTF1-205ENST00000393357 NCALDP61601 193 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 IFI16Q16666 785 aaKnown RBP17.7■□□□□ 0.42
PHTF1-205ENST00000393357 AGBL2Q5U5Z8 902 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 DCAF12L1Q5VU92 463 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 NT5DC3Q86UY8 548 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 TRIM59Q8IWR1 403 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 ARHGEF2Q92974 986 aaKnown RBP17.7■□□□□ 0.42
PHTF1-205ENST00000393357 RMDN2Q96LZ7 410 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 MTA3Q9BTC8 594 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 CCDC169A6NNP5 214 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 RPL21P46778 160 aaKnown RBP17.7■□□□□ 0.42
PHTF1-205ENST00000393357 ADCY7P51828 1080 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 PIGOQ8TEQ8 1089 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 RUBCNQ92622 972 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 ZNF317Q96PQ6 595 aaPredicted RBP17.7■□□□□ 0.42
PHTF1-205ENST00000393357 OSBPL1AQ9BXW6 950 aa17.7■□□□□ 0.42
PHTF1-205ENST00000393357 COL1A1P02452 1464 aaPredicted RBP17.7■□□□□ 0.42
PHTF1-205ENST00000393357 C1orf167Q5SNV9 1468 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 SMIM24O75264 130 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 C2CD6Q53TS8 623 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ZFYVE27Q5T4F4 411 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 LRRC57Q8N9N7 239 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 SPOCK2Q92563 424 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ERP44Q9BS26 406 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 METTL5Q9NRN9 209 aaKnown RBP17.69■□□□□ 0.42
PHTF1-205ENST00000393357 FAM114A2Q9NRY5 505 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 SLIT3O75094 1523 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 WDR91A4D1P6 747 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 AFPP02771 609 aaKnown RBP17.69■□□□□ 0.42
PHTF1-205ENST00000393357 LACTBP83111 547 aaPredicted RBP17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ATP11AP98196 1134 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 IKQ13123 557 aaPredicted RBP17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ZC2HC1CQ53FD0 456 aaPredicted RBP17.69■□□□□ 0.42
PHTF1-205ENST00000393357 KIAA1755Q5JYT7 1200 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ANKRD20A2Q5SQ80 823 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ANKRD20A1Q5TYW2 823 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 C12orf60Q5U649 245 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ANKRD20A3Q5VUR7 823 aa17.69■□□□□ 0.42
PHTF1-205ENST00000393357 ATP8B4Q8TF62 1192 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms