RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 RNF14Q9UBS8 474 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 I3L4J1 428 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 MAP7D1Q3KQU3 841 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 C7orf25Q9BPX7 421 aa17.9■□□□□ 0.46
SCN3B-202ENST00000392770 HGSO14964 777 aaPredicted RBP17.89■□□□□ 0.46
SCN3B-202ENST00000392770 PALMO75781 387 aa17.89■□□□□ 0.46
SCN3B-202ENST00000392770 COG2Q14746 738 aa17.89■□□□□ 0.46
SCN3B-202ENST00000392770 OR6B2Q6IFH4 312 aa17.89■□□□□ 0.46
SCN3B-202ENST00000392770 DAAM1Q9Y4D1 1078 aa17.89■□□□□ 0.46
SCN3B-202ENST00000392770 KNDC1Q76NI1 1749 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 UBE2Q2LH0YL09 131 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 PHKA2P46019 1235 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 ATP1A2P50993 1020 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 EPHB4P54760 987 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 LLGL1Q15334 1064 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 EIF3CLB5ME19 914 aaKnown RBP17.89■□□□□ 0.45
SCN3B-202ENST00000392770 FAM71BQ8TC56 605 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 SAAL1Q96ER3 474 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 EIF3CQ99613 913 aaKnown RBP17.89■□□□□ 0.45
SCN3B-202ENST00000392770 AP1M1Q9BXS5 423 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 SPON1Q9HCB6 807 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 PCDHA10Q9Y5I2 948 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 ECEL1O95672 775 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 ITKQ08881 620 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 ARHGEF6Q15052 776 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 CATSPER4Q7RTX7 472 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 PDLIM2Q96JY6 352 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 USP27XA6NNY8 438 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 STX2P32856 288 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 DYNLT1P63172 113 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 ZNF568Q3ZCX4 644 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 RAB3IL1Q8TBN0 382 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 TBC1D31Q96DN5 1066 aa17.89■□□□□ 0.45
SCN3B-202ENST00000392770 JPH1Q9HDC5 661 aaPredicted RBP17.89■□□□□ 0.45
SCN3B-202ENST00000392770 PRAMEF18Q5VWM3 479 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 FASTKD5Q7L8L6 764 aaKnown RBP17.88■□□□□ 0.45
SCN3B-202ENST00000392770 PARD6BQ9BYG5 372 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.88■□□□□ 0.45
SCN3B-202ENST00000392770 GPC3P51654 580 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 TNFAIP2Q03169 654 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 TROAPQ12815 778 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 TTC26A0AVF1 554 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 NMT1P30419 496 aaKnown RBP17.88■□□□□ 0.45
SCN3B-202ENST00000392770 KCTD6Q8NC69 237 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 CCT6BQ92526 530 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 FAM149B1Q96BN6 582 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 TMEM60Q9H2L4 133 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 MED4Q9NPJ6 270 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 GGA3Q9NZ52 723 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 LRFN2Q9ULH4 789 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 BUB1BO60566 1050 aaPredicted RBP17.88■□□□□ 0.45
SCN3B-202ENST00000392770 USP49Q70CQ1 688 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 C19orf81C9J6K1 198 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 RHOT2Q8IXI1 618 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 FMN2Q9NZ56 1722 aa17.88■□□□□ 0.45
SCN3B-202ENST00000392770 CYFIP1Q7L576 1253 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 SLC38A10Q9HBR0 1119 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 TBX3O15119 743 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 RNASELQ05823 741 aaKnown RBP17.87■□□□□ 0.45
SCN3B-202ENST00000392770 C10orf67Q8IYJ2 551 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 PSPC1Q8WXF1 523 aaKnown RBP17.87■□□□□ 0.45
SCN3B-202ENST00000392770 PPM1EQ8WY54 764 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 LIMA1Q9UHB6 759 aaKnown RBP17.87■□□□□ 0.45
SCN3B-202ENST00000392770 COPB2P35606 906 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 PSMC4P43686 418 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 HDLBPQ00341 1268 aaKnown RBP17.87■□□□□ 0.45
SCN3B-202ENST00000392770 BAATQ14032 418 aaPredicted RBP17.87■□□□□ 0.45
SCN3B-202ENST00000392770 IQCB1Q15051 598 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 AGBL3Q8NEM8 1001 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 A0A1W2PQC6 194 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 SLC7A5Q01650 507 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 APBA1Q02410 837 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 ZNF667Q5HYK9 610 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 ADSSL1Q8N142 457 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 DAGLBQ8NCG7 672 aa17.87■□□□□ 0.45
SCN3B-202ENST00000392770 REEP2Q9BRK0 252 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 SRGNP10124 158 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 GRIN1Q05586 938 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 TTC31Q49AM3 519 aaPredicted RBP17.86■□□□□ 0.45
SCN3B-202ENST00000392770 ERICH1Q86X53 443 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 CABS1Q96KC9 395 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 IFT122Q9HBG6 1241 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.86■□□□□ 0.45
SCN3B-202ENST00000392770 HACL1Q9UJ83 578 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 TUBE1Q9UJT0 475 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 RHOBTB3O94955 611 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 IL1R1P14778 569 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 SAMD7Q7Z3H4 446 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 FRMD5Q7Z6J6 570 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 ZNF668Q96K58 619 aaPredicted RBP17.86■□□□□ 0.45
SCN3B-202ENST00000392770 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.86■□□□□ 0.45
SCN3B-202ENST00000392770 SRGAP2O75044 1071 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 RPS12P25398 132 aaKnown RBP17.86■□□□□ 0.45
SCN3B-202ENST00000392770 PLTPP55058 493 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 ZNF394Q53GI3 561 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 GPD1LQ8N335 351 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 CAPS2Q9BXY5 557 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 MYMKA6NI61 221 aa17.86■□□□□ 0.45
SCN3B-202ENST00000392770 ZNF699Q32M78 642 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms