RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 ARHGAP20Q9P2F6 1191 aa22.03■■□□□ 1.12
PTPN11-202ENST00000392597 SSU72P8A0A1W2PR75 194 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 GTPBP10A4D1E9 387 aaKnown RBP22.02■■□□□ 1.12
PTPN11-202ENST00000392597 CTAGE9A4FU28 777 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 KRT86O43790 486 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 DKC1O60832 514 aaKnown RBP eCLIP22.02■■□□□ 1.12
PTPN11-202ENST00000392597 PSMC2P35998 433 aaKnown RBP22.02■■□□□ 1.12
PTPN11-202ENST00000392597 SPA17Q15506 151 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 GNPTABQ3T906 1256 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 LBX2Q6XYB7 198 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 KIAA1328Q86T90 577 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 SLC9A9Q8IVB4 645 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 SLC17A8Q8NDX2 589 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 MNS1Q8NEH6 495 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 DNERQ8NFT8 737 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 BORCS6Q96GS4 357 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 CCDC43Q96MW1 224 aaKnown RBP22.02■■□□□ 1.12
PTPN11-202ENST00000392597 DMAC2Q9NW81 257 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 PCDHA10Q9Y5I2 948 aa22.02■■□□□ 1.12
PTPN11-202ENST00000392597 PLS3P13797 630 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 KCNA2P16389 499 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 MAPK8IP2Q13387 824 aaPredicted RBP22.01■■□□□ 1.11
PTPN11-202ENST00000392597 PLS1Q14651 629 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 UGCGQ16739 394 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 PROCA1Q8NCQ7 364 aaPredicted RBP22.01■■□□□ 1.11
PTPN11-202ENST00000392597 DRC1Q96MC2 740 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 TSGA10Q9BZW7 698 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 ST6GALNAC4Q9H4F1 302 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 AGPAT3Q9NRZ7 376 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 CGNQ9P2M7 1197 aaKnown RBP22.01■■□□□ 1.11
PTPN11-202ENST00000392597 FBXO40Q9UH90 709 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 WDR81Q562E7 1941 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 LCTP09848 1927 aa22.01■■□□□ 1.11
PTPN11-202ENST00000392597 CLIC2O15247 247 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 PPATQ06203 517 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 SLC35F6Q8N357 371 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 SLC35C1Q96A29 364 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 NAPGQ99747 312 aaPredicted RBP22■■□□□ 1.11
PTPN11-202ENST00000392597 GANQ9H2C0 597 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 TRPM7Q96QT4 1865 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 PFASO15067 1338 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 PASKQ96RG2 1323 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 EFCAB8A8MWE9 144 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 RGS20O76081 388 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 ABL1P00519 1130 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 CASP4P49662 377 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 VAV2P52735 878 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 NAA30Q147X3 362 aaPredicted RBP22■■□□□ 1.11
PTPN11-202ENST00000392597 CCDC122Q5T0U0 273 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 FAM186BQ8IYM0 893 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 JAKMIP2Q96AA8 810 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 CRACR2AQ9BSW2 395 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 TMEM206Q9H813 350 aa22■■□□□ 1.11
PTPN11-202ENST00000392597 K7ENM7 598 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 EIF4A3P38919 411 aaKnown RBP21.99■■□□□ 1.11
PTPN11-202ENST00000392597 KIF11P52732 1056 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 POLR2FP61218 127 aaKnown RBP21.99■■□□□ 1.11
PTPN11-202ENST00000392597 FSTL1Q12841 308 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 EXOC3L4Q17RC7 722 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 TREML2Q5T2D2 321 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 SFMBT2Q5VUG0 894 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 RIOX2Q8IUF8 465 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 ATP6V0A1Q93050 837 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 CARD6Q9BX69 1037 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 PDCL3Q9H2J4 239 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 DEF6Q9H4E7 631 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 FBXL5Q9UKA1 691 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 MYO6Q9UM54 1294 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 GUCA1BQ9UMX6 200 aa21.99■■□□□ 1.11
PTPN11-202ENST00000392597 A0A0G2JLL6 359 aaPredicted RBP21.98■■□□□ 1.11
PTPN11-202ENST00000392597 SPATA31C2B4DYI2 1134 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 USO1O60763 962 aaKnown RBP21.98■■□□□ 1.11
PTPN11-202ENST00000392597 TADA3O75528 432 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 SERPING1P05155 500 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 SNRPFP62306 86 aaKnown RBP21.98■■□□□ 1.11
PTPN11-202ENST00000392597 FKBP1BP68106 108 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 PRRT2Q7Z6L0 340 aaPredicted RBP21.98■■□□□ 1.11
PTPN11-202ENST00000392597 ERO1BQ86YB8 467 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 TXLNBQ8N3L3 684 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 AIPL1Q9NZN9 384 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 CDC23Q9UJX2 597 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 FRMD4BQ9Y2L6 1034 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 CXCL11O14625 94 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 BACH1O14867 736 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 PLEKP08567 350 aaPredicted RBP21.98■■□□□ 1.11
PTPN11-202ENST00000392597 PPP2R5AQ15172 486 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 ASTE1Q2TB18 679 aaPredicted RBP21.98■■□□□ 1.11
PTPN11-202ENST00000392597 SLC9C1Q4G0N8 1177 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 DCAF17Q5H9S7 520 aaPredicted RBP21.98■■□□□ 1.11
PTPN11-202ENST00000392597 HGSNATQ68CP4 663 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 GBP6Q6ZN66 633 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 OTUD6AQ7L8S5 288 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 C12orf56Q8IXR9 622 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 ANKRD13AQ8IZ07 590 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 PDCL2Q8N4E4 241 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 ZNF408Q9H9D4 720 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 JPH1Q9HDC5 661 aaPredicted RBP21.98■■□□□ 1.11
PTPN11-202ENST00000392597 NLRC4Q9NPP4 1024 aa21.98■■□□□ 1.11
PTPN11-202ENST00000392597 ZNF263O14978 683 aa21.97■■□□□ 1.11
PTPN11-202ENST00000392597 CELF2O95319 508 aaKnown RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms