RNA–Protein interactions for RNA: ENST00000390654.7

COL23A1-201, Transcript of collagen type XXIII alpha 1 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL23A1, Length 3,061 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1-201ENST00000390654 NFS1Q9Y697 457 aa22.84■■□□□ 1.25
COL23A1-201ENST00000390654 ASTN1O14525 1302 aa22.84■■□□□ 1.25
COL23A1-201ENST00000390654 AHDC1Q5TGY3 1603 aaPredicted RBP22.84■■□□□ 1.25
COL23A1-201ENST00000390654 TPH2Q8IWU9 490 aa22.84■■□□□ 1.25
COL23A1-201ENST00000390654 ZNF622Q969S3 477 aaKnown RBP eCLIP22.84■■□□□ 1.25
COL23A1-201ENST00000390654 FAM163AQ96GL9 167 aaPredicted RBP22.84■■□□□ 1.25
COL23A1-201ENST00000390654 CD248Q9HCU0 757 aa22.84■■□□□ 1.25
COL23A1-201ENST00000390654 FRMD5Q7Z6J6 570 aa22.83■■□□□ 1.25
COL23A1-201ENST00000390654 CD302Q8IX05 232 aa22.83■■□□□ 1.25
COL23A1-201ENST00000390654 MYCT1Q8N699 235 aa22.83■■□□□ 1.25
COL23A1-201ENST00000390654 SLC35G2Q8TBE7 412 aa22.83■■□□□ 1.25
COL23A1-201ENST00000390654 BBOX1O75936 387 aa22.83■■□□□ 1.25
COL23A1-201ENST00000390654 SPIRE1Q08AE8 756 aa22.83■■□□□ 1.25
COL23A1-201ENST00000390654 NT5DC3Q86UY8 548 aa22.83■■□□□ 1.25
COL23A1-201ENST00000390654 ACTRT1Q8TDG2 376 aa22.83■■□□□ 1.25
COL23A1-201ENST00000390654 LRRC45Q96CN5 670 aa22.83■■□□□ 1.25
COL23A1-201ENST00000390654 SBF2Q86WG5 1849 aa22.83■■□□□ 1.24
COL23A1-201ENST00000390654 DDTLA6NHG4 134 aaPredicted RBP22.83■■□□□ 1.24
COL23A1-201ENST00000390654 CALUO43852 315 aaPredicted RBP22.83■■□□□ 1.24
COL23A1-201ENST00000390654 FAM107AO95990 144 aa22.83■■□□□ 1.24
COL23A1-201ENST00000390654 HLA-DOAP06340 250 aa22.83■■□□□ 1.24
COL23A1-201ENST00000390654 MCTP2Q6DN12 878 aa22.83■■□□□ 1.24
COL23A1-201ENST00000390654 VPS36Q86VN1 386 aa22.83■■□□□ 1.24
COL23A1-201ENST00000390654 FNTAP49354 379 aa22.82■■□□□ 1.24
COL23A1-201ENST00000390654 TBC1D10BQ4KMP7 808 aaPredicted RBP22.82■■□□□ 1.24
COL23A1-201ENST00000390654 UBAP2Q5T6F2 1119 aaKnown RBP22.82■■□□□ 1.24
COL23A1-201ENST00000390654 ARHGEF26Q96DR7 871 aa22.82■■□□□ 1.24
COL23A1-201ENST00000390654 DNAJC18Q9H819 358 aa22.82■■□□□ 1.24
COL23A1-201ENST00000390654 SPDYE3A6NKU9 549 aa22.82■■□□□ 1.24
COL23A1-201ENST00000390654 IFI16Q16666 785 aaKnown RBP22.82■■□□□ 1.24
COL23A1-201ENST00000390654 CRY2Q49AN0 593 aa22.82■■□□□ 1.24
COL23A1-201ENST00000390654 PPP1R18Q6NYC8 613 aa22.82■■□□□ 1.24
COL23A1-201ENST00000390654 ETNPPLQ8TBG4 499 aa22.82■■□□□ 1.24
COL23A1-201ENST00000390654 JPH2Q9BR39 696 aaPredicted RBP22.82■■□□□ 1.24
COL23A1-201ENST00000390654 ERVK-5Q9HDB9 667 aa22.82■■□□□ 1.24
COL23A1-201ENST00000390654 TRAF3IP3Q9Y228 551 aa22.82■■□□□ 1.24
COL23A1-201ENST00000390654 CUL1Q13616 776 aa22.81■■□□□ 1.24
COL23A1-201ENST00000390654 SYT2Q8N9I0 419 aaPredicted RBP22.81■■□□□ 1.24
COL23A1-201ENST00000390654 DDX20Q9UHI6 824 aaKnown RBP22.81■■□□□ 1.24
COL23A1-201ENST00000390654 SHBGP04278 402 aa22.81■■□□□ 1.24
COL23A1-201ENST00000390654 DRAP1Q14919 205 aaPredicted RBP22.81■■□□□ 1.24
COL23A1-201ENST00000390654 SEPT12Q8IYM1 358 aa22.81■■□□□ 1.24
COL23A1-201ENST00000390654 AMFRQ9UKV5 643 aa22.81■■□□□ 1.24
COL23A1-201ENST00000390654 CDK5RAP2Q96SN8 1893 aa22.81■■□□□ 1.24
COL23A1-201ENST00000390654 GOLGA6L7A0A1B0GV03 622 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 FRMD3A2A2Y4 597 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 GMNCA6NCL1 334 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 MSH4O15457 936 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 KRT13P13646 458 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 STAT1P42224 750 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 PLTPP55058 493 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 PPP4R3CPQ6ZMV5 832 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 MICALCLQ6ZW33 695 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 CCDC13Q8IYE1 715 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 SLFN12Q8IYM2 578 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 ERMNQ8TAM6 284 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 DNAJC12Q9UKB3 198 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 SNX24Q9Y343 169 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 UTP11Q9Y3A2 253 aaKnown RBP22.8■■□□□ 1.24
COL23A1-201ENST00000390654 RABGAP1Q9Y3P9 1069 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 BTAF1O14981 1849 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 CBWD6Q4V339 395 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 CBWD3Q5JTY5 395 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 CBWD5Q5RIA9 395 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 DCAF12L1Q5VU92 463 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 ARHGAP27Q6ZUM4 889 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 TMC3Q7Z5M5 1100 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 FAM186BQ8IYM0 893 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 CABS1Q96KC9 395 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 BZW2Q9Y6E2 419 aaKnown RBP22.8■■□□□ 1.24
COL23A1-201ENST00000390654 TGFB1I1O43294 461 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 RPA1P27694 616 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 ZYXQ15942 572 aaKnown RBP22.8■■□□□ 1.24
COL23A1-201ENST00000390654 RAPGEF5Q92565 580 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 THAP2Q9H0W7 228 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 TYW1Q9NV66 732 aaKnown RBP22.8■■□□□ 1.24
COL23A1-201ENST00000390654 PNMA2Q9UL42 364 aa22.8■■□□□ 1.24
COL23A1-201ENST00000390654 PDXKO00764 312 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 ZNF746Q6NUN9 644 aaPredicted RBP22.79■■□□□ 1.24
COL23A1-201ENST00000390654 TEKT1Q969V4 418 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 LENG9Q96B70 501 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 EIF2AK1Q9BQI3 630 aaKnown RBP22.79■■□□□ 1.24
COL23A1-201ENST00000390654 SLC12A6Q9UHW9 1150 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 A6NNZ2 444 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 FAM13AO94988 1023 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 USP8P40818 1118 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 PPP2R2AP63151 447 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 TUBB8Q3ZCM7 444 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 APOBEC3HQ6NTF7 200 aaKnown RBP22.79■■□□□ 1.24
COL23A1-201ENST00000390654 CCDC121Q6ZUS5 278 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 PRPF38AQ8NAV1 312 aaKnown RBP22.79■■□□□ 1.24
COL23A1-201ENST00000390654 CCDC26Q8TAB7 109 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 CCDC114Q96M63 670 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 PITPNM2Q9BZ72 1349 aa22.79■■□□□ 1.24
COL23A1-201ENST00000390654 CAND2O75155 1236 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 ZBTB48P10074 688 aaPredicted RBP22.78■■□□□ 1.24
COL23A1-201ENST00000390654 SLCO1A2P46721 670 aa22.78■■□□□ 1.24
COL23A1-201ENST00000390654 ACTN3Q08043 901 aaPredicted RBP22.78■■□□□ 1.24
COL23A1-201ENST00000390654 CERKLQ49MI3 558 aaPredicted RBP22.78■■□□□ 1.24
COL23A1-201ENST00000390654 CNPY4Q8N129 248 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms