RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 METTL13Q8N6R0 699 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 ENAHQ8N8S7 591 aaPredicted RBP15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 KIAA0895Q8NCT3 520 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 ATP8B4Q8TF62 1192 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 HPS3Q969F9 1004 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 ZCWPW1Q9H0M4 648 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 GOLPH3Q9H4A6 298 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 RNF41Q9H4P4 317 aaPredicted RBP15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 AZI2Q9H6S1 392 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 ZMYND8Q9ULU4 1186 aaPredicted RBP15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 ARAP2Q8WZ64 1704 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 BAZ2AQ9UIF9 1905 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 SUN1O94901 812 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 RPS8P62241 208 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 SLC27A3Q5K4L6 730 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 GPR101Q96P66 508 aaPredicted RBP15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 C7orf25Q9BPX7 421 aa15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 PABPC3Q9H361 631 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 UTP11Q9Y3A2 253 aaKnown RBP15.9■□□□□ 0.14
VPS9D1-201ENST00000389386 BTNL10A8MVZ5 291 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 RGS16O15492 202 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 NOL4O94818 638 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 PDHA1P08559 390 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 ASIC1P78348 528 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 CNGA2Q16280 664 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 TMTC3Q6ZXV5 915 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 FITM2Q8N6M3 262 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 LRRC57Q8N9N7 239 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 TBC1D16Q8TBP0 767 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 RNF25Q96BH1 459 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 CEP72Q9P209 647 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 BCORQ6W2J9 1755 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 E7ENQ6 273 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 GJB6O95452 261 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 AGTP01019 485 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 CALB2P22676 271 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 GBP1P32455 592 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 POU5F1Q01860 360 aaKnown RBP15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 EN1Q05925 392 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 TROAPQ12815 778 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 DIXDC1Q155Q3 683 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 FAM83BQ5T0W9 1011 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 CATIPQ7Z7H3 387 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 TRIM74Q86UV6 250 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 TRIM73Q86UV7 250 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 COL23A1Q86Y22 540 aaPredicted RBP15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 FAM81AQ8TBF8 368 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 TMEM60Q9H2L4 133 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 CUEDC2Q9H467 287 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 RNPEPL1Q9HAU8 725 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 ADAMTS1Q9UHI8 967 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 DOCK2Q92608 1830 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 SRCAPQ6ZRS2 3230 aa15.89■□□□□ 0.13
VPS9D1-201ENST00000389386 CCNB1P14635 433 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 VEGFAP15692 232 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 PRDX5P30044 214 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 CUL3Q13618 768 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 UTP4Q969X6 686 aaKnown RBP15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 RBM41Q96IZ5 413 aaKnown RBP15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 ZMYND12Q9H0C1 365 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 MAGEF1Q9HAY2 307 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 RXFP1Q9HBX9 757 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 CNTNAP5Q8WYK1 1306 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 GYS1P13807 737 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 PLCG1P19174 1290 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 SP100P23497 879 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 RANBP1P43487 201 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 UBE4AQ14139 1066 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 TMEM154Q6P9G4 183 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 RASGEF1CQ8N431 466 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 SRBD1Q8N5C6 995 aaKnown RBP15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 NEK9Q8TD19 979 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 BICD1Q96G01 975 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 TRIM4Q9C037 500 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 ZDHHC18Q9NUE0 388 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 FGFR1OP2Q9NVK5 253 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 ZNF804BA4D1E1 1349 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 O00370 1275 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 PEX5P50542 639 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 PMS2P54278 862 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 C6orf118Q5T5N4 469 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 DENND2CQ68D51 928 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 CNNM4Q6P4Q7 775 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 APBB1IPQ7Z5R6 666 aaPredicted RBP15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 FBF1Q8TES7 1133 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 ESR2Q92731 530 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 RPS6KC1Q96S38 1066 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 TRIM51Q9BSJ1 452 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 TRIM31Q9BZY9 425 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 PCMTD2Q9NV79 361 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 CHCHD3Q9NX63 227 aaKnown RBP15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 ARL2BPQ9Y2Y0 163 aa15.88■□□□□ 0.13
VPS9D1-201ENST00000389386 MYH4Q9Y623 1939 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 SMIM23A6NLE4 172 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 SCG2P13521 617 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 RAD23BP54727 409 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 KLC1Q07866 573 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 PTPROQ16827 1216 aa15.87■□□□□ 0.13
VPS9D1-201ENST00000389386 TPTE2Q6XPS3 522 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms