RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 TMOD1P28289 359 aa29.87■■■□□ 2.37
NPHP3-202ENST00000383282 GTF2F1P35269 517 aaKnown RBP eCLIP29.87■■■□□ 2.37
NPHP3-202ENST00000383282 NDUFV1P49821 464 aa29.87■■■□□ 2.37
NPHP3-202ENST00000383282 DLX2Q07687 328 aaPredicted RBP29.87■■■□□ 2.37
NPHP3-202ENST00000383282 SMAD4Q13485 552 aaKnown RBP29.87■■■□□ 2.37
NPHP3-202ENST00000383282 SMAD2Q15796 467 aaKnown RBP29.87■■■□□ 2.37
NPHP3-202ENST00000383282 MAP7D2Q96T17 732 aa29.87■■■□□ 2.37
NPHP3-202ENST00000383282 POP1Q99575 1024 aaKnown RBP29.87■■■□□ 2.37
NPHP3-202ENST00000383282 UPF3BQ9BZI7 483 aaKnown RBP29.87■■■□□ 2.37
NPHP3-202ENST00000383282 CD207Q9UJ71 328 aa29.87■■■□□ 2.37
NPHP3-202ENST00000383282 C9IYK1 514 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 DCXO43602 365 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 TBX10O75333 385 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 DNAJB1P25685 340 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 CCT2P78371 535 aaKnown RBP29.86■■■□□ 2.37
NPHP3-202ENST00000383282 ADAM15Q13444 863 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 FAM228AQ86W67 206 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 ATP6V0A4Q9HBG4 840 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 SH3GLB2Q9NR46 395 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 NRBP2Q9NSY0 501 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 AKT3Q9Y243 479 aa29.86■■■□□ 2.37
NPHP3-202ENST00000383282 LOXHD1Q8IVV2 1947 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 GPR32O75388 356 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 PDIA3P30101 505 aaKnown RBP29.85■■■□□ 2.37
NPHP3-202ENST00000383282 IRS1P35568 1242 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 USP11P51784 963 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 CLCN3P51790 818 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 NLRP5P59047 1200 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 CSPP1Q1MSJ5 1256 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 TRIM22Q8IYM9 498 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 ZNF710Q8N1W2 664 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 LENG9Q96B70 501 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 C22orf23Q9BZE7 217 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 DISC1Q9NRI5 854 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 TMEM161AQ9NX61 479 aa29.85■■■□□ 2.37
NPHP3-202ENST00000383282 C19orf67A6NJJ6 358 aa29.84■■■□□ 2.37
NPHP3-202ENST00000383282 LINC01565O15544 149 aa29.84■■■□□ 2.37
NPHP3-202ENST00000383282 GAS7O60861 476 aa29.84■■■□□ 2.37
NPHP3-202ENST00000383282 UBE3AQ05086 875 aa29.84■■■□□ 2.37
NPHP3-202ENST00000383282 EFCAB12Q6NXP0 572 aa29.84■■■□□ 2.37
NPHP3-202ENST00000383282 ADGRD2Q7Z7M1 963 aa29.84■■■□□ 2.37
NPHP3-202ENST00000383282 MICAL1Q8TDZ2 1067 aa29.84■■■□□ 2.37
NPHP3-202ENST00000383282 RIT2Q99578 217 aa29.84■■■□□ 2.37
NPHP3-202ENST00000383282 ELAC1Q9H777 363 aaKnown RBP29.84■■■□□ 2.37
NPHP3-202ENST00000383282 NCOA5Q9HCD5 579 aaKnown RBP29.84■■■□□ 2.37
NPHP3-202ENST00000383282 ATG2AQ2TAZ0 1938 aa29.83■■■□□ 2.37
NPHP3-202ENST00000383282 MSH4O15457 936 aa29.83■■■□□ 2.37
NPHP3-202ENST00000383282 OATP04181 439 aa29.83■■■□□ 2.37
NPHP3-202ENST00000383282 SFNP31947 248 aa29.83■■■□□ 2.37
NPHP3-202ENST00000383282 EVCP57679 992 aa29.83■■■□□ 2.37
NPHP3-202ENST00000383282 FAM102BQ5T8I3 360 aa29.83■■■□□ 2.37
NPHP3-202ENST00000383282 EFHBQ8N7U6 833 aa29.83■■■□□ 2.37
NPHP3-202ENST00000383282 TEKT3Q9BXF9 490 aa29.83■■■□□ 2.37
NPHP3-202ENST00000383282 ZSCAN20P17040 1043 aaPredicted RBP29.82■■■□□ 2.36
NPHP3-202ENST00000383282 NRIP1P48552 1158 aa29.82■■■□□ 2.36
NPHP3-202ENST00000383282 JAK3P52333 1124 aa29.82■■■□□ 2.36
NPHP3-202ENST00000383282 NLRP11P59045 1033 aaKnown RBP29.82■■■□□ 2.36
NPHP3-202ENST00000383282 RUFY3Q7L099 469 aa29.82■■■□□ 2.36
NPHP3-202ENST00000383282 THNSL1Q8IYQ7 743 aa29.82■■■□□ 2.36
NPHP3-202ENST00000383282 PPP4R2Q9NY27 417 aa29.82■■■□□ 2.36
NPHP3-202ENST00000383282 CPLX1O14810 134 aa29.81■■■□□ 2.36
NPHP3-202ENST00000383282 HOXA2O43364 376 aa29.81■■■□□ 2.36
NPHP3-202ENST00000383282 EPB41L2O43491 1005 aaKnown RBP29.81■■■□□ 2.36
NPHP3-202ENST00000383282 CHMP2AO43633 222 aa29.81■■■□□ 2.36
NPHP3-202ENST00000383282 PRKCEQ02156 737 aa29.81■■■□□ 2.36
NPHP3-202ENST00000383282 SSRP1Q08945 709 aaKnown RBP29.81■■■□□ 2.36
NPHP3-202ENST00000383282 LRCH2Q5VUJ6 765 aa29.81■■■□□ 2.36
NPHP3-202ENST00000383282 RBM23Q86U06 439 aaKnown RBP29.81■■■□□ 2.36
NPHP3-202ENST00000383282 LRRC71Q8N4P6 559 aa29.81■■■□□ 2.36
NPHP3-202ENST00000383282 TLR9Q9NR96 1032 aa29.81■■■□□ 2.36
NPHP3-202ENST00000383282 TYW1Q9NV66 732 aaKnown RBP29.81■■■□□ 2.36
NPHP3-202ENST00000383282 EVPLQ92817 2033 aa29.8■■■□□ 2.36
NPHP3-202ENST00000383282 LAG3P18627 525 aa29.8■■■□□ 2.36
NPHP3-202ENST00000383282 FAM189BP81408 668 aa29.8■■■□□ 2.36
NPHP3-202ENST00000383282 DSC3Q14574 896 aa29.8■■■□□ 2.36
NPHP3-202ENST00000383282 TBCKQ8TEA7 893 aa29.8■■■□□ 2.36
NPHP3-202ENST00000383282 SCLT1Q96NL6 688 aa29.8■■■□□ 2.36
NPHP3-202ENST00000383282 TLE6Q9H808 572 aa29.8■■■□□ 2.36
NPHP3-202ENST00000383282 KIAA1671Q9BY89 1806 aa29.8■■■□□ 2.36
NPHP3-202ENST00000383282 MYH9P35579 1960 aaKnown RBP29.79■■■□□ 2.36
NPHP3-202ENST00000383282 FSD2A1L4K1 749 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 ZNF862O60290 1169 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 FGF18O76093 207 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 FGFR1P11362 822 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 EIF4BP23588 611 aaKnown RBP29.79■■■□□ 2.36
NPHP3-202ENST00000383282 LINC01465Q8N7H1 131 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 COLGALT1Q8NBJ5 622 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 SLC5A5Q92911 643 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 MSLNLQ96KJ4 702 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 TMEM117Q9H0C3 514 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 ZSWIM6Q9HCJ5 1215 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 PCDHA4Q9UN74 947 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 CYP46A1Q9Y6A2 500 aa29.79■■■□□ 2.36
NPHP3-202ENST00000383282 DEXIO95424 95 aa29.78■■■□□ 2.36
NPHP3-202ENST00000383282 EYA4O95677 639 aa29.78■■■□□ 2.36
NPHP3-202ENST00000383282 TBC1D8BQ0IIM8 1120 aa29.78■■■□□ 2.36
NPHP3-202ENST00000383282 TOB2Q14106 344 aaPredicted RBP29.78■■■□□ 2.36
NPHP3-202ENST00000383282 PDE12Q6L8Q7 609 aaKnown RBP29.78■■■□□ 2.36
NPHP3-202ENST00000383282 CPLX2Q6PUV4 134 aaKnown RBP29.78■■■□□ 2.36
NPHP3-202ENST00000383282 ABI1Q8IZP0 508 aa29.78■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms