RNA–Protein interactions for RNA: ENST00000381578.6

SHOX-203, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SHOX, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-203ENST00000381578 PICALMQ13492 652 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 UBE2SQ16763 222 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 ZNF746Q6NUN9 644 aaPredicted RBP13.14□□□□□ -0.31
SHOX-203ENST00000381578 TMC3Q7Z5M5 1100 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 FAM228AQ86W67 206 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 UBL4BQ8N7F7 174 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 KBTBD4Q9NVX7 518 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 GCNT4Q9P109 453 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 TMEM120BA0PK00 339 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 KLRC4O43908 158 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 SNUPNO95149 360 aaKnown RBP13.14□□□□□ -0.31
SHOX-203ENST00000381578 RFC4P35249 363 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 SLC8A3P57103 927 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 PLCB3Q01970 1234 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 LRRC63Q05C16 580 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 INTS5Q6P9B9 1019 aaKnown RBP13.14□□□□□ -0.31
SHOX-203ENST00000381578 SPATA21Q7Z572 469 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 PIK3R5Q8WYR1 880 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 OSGEPQ9NPF4 335 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 PAPOLBQ9NRJ5 636 aaKnown RBP13.14□□□□□ -0.31
SHOX-203ENST00000381578 EMILIN3Q9NT22 766 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 PCDHA12Q9UN75 941 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 AFF2P51816 1311 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 RASSF10A6NK89 507 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 C6orf229H3BNL8 230 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 TXNDC9O14530 226 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 CHMP2AO43633 222 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 MYL1P05976 194 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 EEF2P13639 858 aaKnown RBP13.14□□□□□ -0.31
SHOX-203ENST00000381578 CCND1P24385 295 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 TARSP26639 723 aaKnown RBP13.14□□□□□ -0.31
SHOX-203ENST00000381578 ADCY8P40145 1251 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 USP11P51784 963 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 MRPL12P52815 198 aaKnown RBP13.14□□□□□ -0.31
SHOX-203ENST00000381578 ITIH3Q06033 890 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 SEC23AQ15436 765 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 TBC1D10BQ4KMP7 808 aaPredicted RBP13.14□□□□□ -0.31
SHOX-203ENST00000381578 HHATQ5VTY9 493 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 CHADLQ6NUI6 762 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 TMED8Q6PL24 325 aaPredicted RBP13.14□□□□□ -0.31
SHOX-203ENST00000381578 TBC1D22AQ8WUA7 517 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 SHISA4Q96DD7 197 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 ERP27Q96DN0 273 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 TMEM237Q96Q45 408 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 CUEDC2Q9H467 287 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.14□□□□□ -0.31
SHOX-203ENST00000381578 DCTN4Q9UJW0 460 aa13.14□□□□□ -0.31
SHOX-203ENST00000381578 DISP2A7MBM2 1401 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 CCT6BQ92526 530 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 NAF1Q96HR8 494 aaKnown RBP13.13□□□□□ -0.31
SHOX-203ENST00000381578 CYTH2Q99418 400 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 METTL5Q9NRN9 209 aaKnown RBP13.13□□□□□ -0.31
SHOX-203ENST00000381578 ZFATQ9P243 1243 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 KCPQ6ZWJ8 1503 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 KIF3CO14782 793 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 KRT16P08779 473 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 RWDD2BP57060 319 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 COPS2P61201 443 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 DYDC2Q96IM9 177 aa13.13□□□□□ -0.31
SHOX-203ENST00000381578 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
SHOX-203ENST00000381578 TCRBV5S4A2TA0A5A2 114 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 WTIPA6NIX2 430 aaPredicted RBP13.12□□□□□ -0.31
SHOX-203ENST00000381578 STXBP3O00186 592 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 ADCY2Q08462 1091 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 COASYQ13057 564 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 XRCC4Q13426 336 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 NSMFQ6X4W1 530 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 APBB1IPQ7Z5R6 666 aaPredicted RBP13.12□□□□□ -0.31
SHOX-203ENST00000381578 EGFL6Q8IUX8 553 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 GUF1Q8N442 669 aaKnown RBP13.12□□□□□ -0.31
SHOX-203ENST00000381578 SIK3Q9Y2K2 1263 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 SIPA1L3O60292 1781 aaPredicted RBP13.12□□□□□ -0.31
SHOX-203ENST00000381578 CCDC189A1A4V9 331 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 RCN2Q14257 317 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 WLSQ5T9L3 541 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 LRRC47Q8N1G4 583 aaKnown RBP13.12□□□□□ -0.31
SHOX-203ENST00000381578 AK8Q96MA6 479 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 INPP4AQ96PE3 977 aaPredicted RBP13.12□□□□□ -0.31
SHOX-203ENST00000381578 SCOCQ9UIL1 159 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 HAO1Q9UJM8 370 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 TRPC5Q9UL62 973 aaPredicted RBP13.12□□□□□ -0.31
SHOX-203ENST00000381578 PRPHP41219 470 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 GALCP54803 685 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 LRRC23Q53EV4 343 aaPredicted RBP13.12□□□□□ -0.31
SHOX-203ENST00000381578 AADACL2Q6P093 401 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 C18orf8Q96DM3 657 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 QTRT2Q9H974 415 aaKnown RBP13.12□□□□□ -0.31
SHOX-203ENST00000381578 RIC8AQ9NPQ8 531 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 SPATA31A6Q5VVP1 1343 aa13.12□□□□□ -0.31
SHOX-203ENST00000381578 AFPP02771 609 aaKnown RBP13.11□□□□□ -0.31
SHOX-203ENST00000381578 PRDX5P30044 214 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 ATP5DP30049 168 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 RASSF2P50749 326 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 KIAA1755Q5JYT7 1200 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 ZNF365Q70YC5 407 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 SEPT12Q8IYM1 358 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 ZNF34Q8IZ26 560 aa13.11□□□□□ -0.31
SHOX-203ENST00000381578 GJD4Q96KN9 370 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms