RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 DTX3LQ8TDB6 740 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 SCG3Q8WXD2 468 aaKnown RBP20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 PITPNM3Q9BZ71 974 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 CARD9Q9H257 536 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 TRAF5O00463 557 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 FAM200BP0CF97 657 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 PPP1R2P41236 205 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 LRP10Q7Z4F1 713 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 PPFIBP2Q8ND30 876 aa20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 DENND2DQ9H6A0 471 aaPredicted RBP20.51■□□□□ 0.87
SMARCD1-201ENST00000381513 AMPD3Q01432 767 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 LCA5Q86VQ0 697 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 RBM17Q96I25 401 aaKnown RBP20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 ZNF333Q96JL9 665 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 CCDC87Q9NVE4 849 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 PHF24Q9UPV7 400 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 ECM29Q5VYK3 1845 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 DISP2A7MBM2 1401 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 ZNF211Q13398 564 aaPredicted RBP20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 INF2Q27J81 1249 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 CROCCP2Q86T23 111 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 LRRC37BQ96QE4 947 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 ANAPC4Q9UJX5 808 aa20.5■□□□□ 0.87
SMARCD1-201ENST00000381513 SMIM22K7EJ46 135 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 ACSL3O95573 720 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 SCG2P13521 617 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 SKIV2L2P42285 1042 aaKnown RBP20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 CENPPQ6IPU0 288 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 ALKBH5Q6P6C2 394 aaKnown RBP20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 LCORLQ8N3X6 602 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 ENAHQ8N8S7 591 aaPredicted RBP20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 GPKOWQ92917 476 aaPredicted RBP eCLIP20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 TSG101Q99816 390 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 KIAA1683Q9H0B3 1180 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 DCLRE1BQ9H816 532 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 RTCBQ9Y3I0 505 aaKnown RBP20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 RCN1Q15293 331 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 PARP6Q2NL67 630 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 KIAA1755Q5JYT7 1200 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 EDEM3Q9BZQ6 932 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 RASAL2Q9UJF2 1139 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 MAGEA13PA6NCF6 341 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 TJP3O95049 919 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 CBX6O95503 412 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 PTK2Q05397 1052 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 FUT2Q10981 343 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 PPP2R5BQ15173 497 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 TPCN2Q8NHX9 752 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 DYDC2Q96IM9 177 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 TXLNGYQ9BZA5 131 aa20.49■□□□□ 0.87
SMARCD1-201ENST00000381513 USP46P62068 366 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 TMEM62Q0P6H9 643 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 FAM136AQ96C01 138 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 LRMDAQ9H2I8 198 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 TBK1Q9UHD2 729 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 BRAFP15056 766 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 BLIDQ8IZY5 108 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 FBXO41Q8TF61 875 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 FAM89AQ96GI7 184 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 HIC2Q96JB3 615 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 ZDHHC18Q9NUE0 388 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 AMFRQ9UKV5 643 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 RASA1P20936 1047 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 JAMLQ86YT9 394 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 C4orf32Q8N8J7 132 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 CDK5RAP3Q96JB5 506 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 PHACTR1Q9C0D0 580 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 NKIRAS1Q9NYS0 192 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 MTMR7Q9Y216 660 aa20.48■□□□□ 0.87
SMARCD1-201ENST00000381513 HNRNPRO43390 633 aaKnown RBP20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 NOL4O94818 638 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 PSMC4P43686 418 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 KLRC3Q07444 240 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 CNPY1Q3B7I2 92 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 KHDC1Q4VXA5 237 aaKnown RBP20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 SRBD1Q8N5C6 995 aaKnown RBP20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 HELBQ8NG08 1087 aaPredicted RBP20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 SDR42E1Q8WUS8 393 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 IFT43Q96FT9 208 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 DDX27Q96GQ7 796 aaKnown RBP20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 ZSCAN10Q96SZ4 725 aaPredicted RBP20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 ATP5HO75947 161 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 CCNFP41002 786 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 TNIP1Q15025 636 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 SPDYCQ5MJ68 293 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 DUPD1Q68J44 220 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 LRRC57Q8N9N7 239 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 ANKLE1Q8NAG6 615 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 ABTB1Q969K4 478 aaPredicted RBP20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 CCSER1Q9C0I3 900 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 PCDH11XQ9BZA7 1347 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 NID2Q14112 1375 aa20.47■□□□□ 0.87
SMARCD1-201ENST00000381513 RPTORQ8N122 1335 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 RASSF2P50749 326 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 CKAP2Q8WWK9 683 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 SEC14L1Q92503 715 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms