RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 SYT2Q8N9I0 419 aaPredicted RBP14.1□□□□□ -0.15
SMN1-202ENST00000380707 WNT8BQ93098 351 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 PDLIM7Q9NR12 457 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 BMP2KQ9NSY1 1161 aaPredicted RBP14.1□□□□□ -0.15
SMN1-202ENST00000380707 NOD1Q9Y239 953 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 PPME1Q9Y570 386 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 PCDHA2Q9Y5H9 948 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 IGKV6-21A0A0C4DH24 114 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 TLR3O15455 904 aaKnown RBP14.1□□□□□ -0.15
SMN1-202ENST00000380707 MAGEB2O15479 319 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 CAPN15O75808 1086 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 DGAT1O75907 488 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 SSBP05455 408 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMN1-202ENST00000380707 RFC5P40937 340 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 POLGP54098 1239 aaPredicted RBP14.1□□□□□ -0.15
SMN1-202ENST00000380707 PTK7Q13308 1070 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 MKRN4PQ13434 485 aaPredicted RBP14.1□□□□□ -0.15
SMN1-202ENST00000380707 DRP2Q13474 957 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 DHX8Q14562 1220 aaKnown RBP14.1□□□□□ -0.15
SMN1-202ENST00000380707 EFCAB12Q6NXP0 572 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 LRRC71Q8N4P6 559 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 LINC01465Q8N7H1 131 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 IQUBQ8NA54 791 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 SLC7A3Q8WY07 619 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 LARP4BQ92615 738 aaKnown RBP14.1□□□□□ -0.15
SMN1-202ENST00000380707 DHX38Q92620 1227 aaKnown RBP14.1□□□□□ -0.15
SMN1-202ENST00000380707 DHX58Q96C10 678 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 RUSC1Q9BVN2 902 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 SUGCTQ9HAC7 445 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 XPNPEP1Q9NQW7 623 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 STK17AQ9UEE5 414 aa14.1□□□□□ -0.15
SMN1-202ENST00000380707 ARID2Q68CP9 1835 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 SMIM35A0A1B0GVV1 85 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 USO1O60763 962 aaKnown RBP14.09□□□□□ -0.15
SMN1-202ENST00000380707 CLTBP09497 229 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 CLCN3P51790 818 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 EMC2Q15006 297 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 ARSHQ5FYA8 562 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 RINT1Q6NUQ1 792 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 C1orf186Q6ZWK4 172 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 SH3RF1Q7Z6J0 888 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 KIAA0319LQ8IZA0 1049 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 RETREG2Q8NC44 543 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 DNAJB3Q8WWF6 145 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 HTATIP2Q9BUP3 242 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 FAM49AQ9H0Q0 323 aaPredicted RBP14.09□□□□□ -0.15
SMN1-202ENST00000380707 POLD4Q9HCU8 107 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 ALPK3Q96L96 1907 aa14.09□□□□□ -0.15
SMN1-202ENST00000380707 ATXN8OSP0DMR3 200 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 CYP11B2P19099 503 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 SYKP43405 635 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 UBE2HP62256 183 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 SNW1Q13573 536 aaKnown RBP14.08□□□□□ -0.16
SMN1-202ENST00000380707 TRIM71Q2Q1W2 868 aaKnown RBP14.08□□□□□ -0.16
SMN1-202ENST00000380707 LONRF3Q496Y0 759 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 TAF2Q6P1X5 1199 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 MAEAQ7L5Y9 396 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 EXOC8Q8IYI6 725 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 ENGASEQ8NFI3 743 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 TMEM143Q96AN5 459 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 MTRQ99707 1265 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 JPH2Q9BR39 696 aaPredicted RBP14.08□□□□□ -0.16
SMN1-202ENST00000380707 ATP6V0A4Q9HBG4 840 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 LMBRD1Q9NUN5 540 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 TMEM39AQ9NV64 488 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 TBX21Q9UL17 535 aa14.08□□□□□ -0.16
SMN1-202ENST00000380707 NPHP3-ACAD11A0A0J9YXS1 232 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 TRIM43BA6NCK2 446 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 ACTN4O43707 911 aaKnown RBP14.07□□□□□ -0.16
SMN1-202ENST00000380707 ZNF202O95125 648 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 LIG1P18858 919 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 TMOD1P28289 359 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 THPOP40225 353 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 RAD51AP2Q09MP3 1159 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 SV2BQ7L1I2 683 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 GPBP1Q86WP2 473 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 C7orf61Q8IZ16 206 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 FMR1NBQ8N0W7 255 aaPredicted RBP14.07□□□□□ -0.16
SMN1-202ENST00000380707 STAMQ92783 540 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 DPF3Q92784 378 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 EVPLQ92817 2033 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 TRIM43Q96BQ3 446 aaPredicted RBP14.07□□□□□ -0.16
SMN1-202ENST00000380707 CUEDC2Q9H467 287 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 GPRC5CQ9NQ84 441 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 KBTBD4Q9NVX7 518 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 PCDH10Q9P2E7 1040 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 SUCLA2Q9P2R7 463 aaPredicted RBP14.07□□□□□ -0.16
SMN1-202ENST00000380707 SERTAD1Q9UHV2 236 aa14.07□□□□□ -0.16
SMN1-202ENST00000380707 RBAK-RBAKDNI3L0D1 243 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 EVI5O60447 810 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 NR1I2O75469 434 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 VTNP04004 478 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 SLFN14P0C7P3 912 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 CKBP12277 381 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 ITGB8P26012 769 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 RGS19P49795 217 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 DNM2P50570 870 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 FAM160A1Q05DH4 1040 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 TMEM62Q0P6H9 643 aa14.06□□□□□ -0.16
SMN1-202ENST00000380707 FAM102BQ5T8I3 360 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms