RNA–Protein interactions for RNA: ENST00000380494.9

COL4A3BP-203, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2 BASIC

Gene COL4A3BP, Length 5,651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-203ENST00000380494 WWP1Q9H0M0 922 aa18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 DNAJC17Q9NVM6 304 aaKnown RBP18.27■□□□□ 0.52
COL4A3BP-203ENST00000380494 ESYT3A0FGR9 886 aa18.27■□□□□ 0.51
COL4A3BP-203ENST00000380494 ZNF233A6NK53 670 aa18.27■□□□□ 0.51
COL4A3BP-203ENST00000380494 PRR29P0C7W0 189 aa18.27■□□□□ 0.51
COL4A3BP-203ENST00000380494 TRIM67Q6ZTA4 783 aa18.27■□□□□ 0.51
COL4A3BP-203ENST00000380494 SLC38A10Q9HBR0 1119 aa18.27■□□□□ 0.51
COL4A3BP-203ENST00000380494 ARHGAP26Q9UNA1 814 aa18.27■□□□□ 0.51
COL4A3BP-203ENST00000380494 OCRLQ01968 901 aa18.27■□□□□ 0.51
COL4A3BP-203ENST00000380494 NBPF3Q9H094 633 aa18.27■□□□□ 0.51
COL4A3BP-203ENST00000380494 GPHNQ9NQX3 736 aaPredicted RBP18.27■□□□□ 0.51
COL4A3BP-203ENST00000380494 TRIM49BA6NDI0 452 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 KDM1AO60341 852 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 LCA5Q86VQ0 697 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 LRRC1Q9BTT6 524 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 IGSF1Q8N6C5 1336 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 HIC1Q14526 733 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 FAM83BQ5T0W9 1011 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 AIFM3Q96NN9 605 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 PIGSQ96S52 555 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 TTC1Q99614 292 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 PPCSQ9HAB8 311 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 L3MBTL1Q9Y468 752 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 GOLGA8SH3BPF8 625 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 NVLO15381 856 aaKnown RBP18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 PDXDC1Q6P996 788 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 STAG2Q8N3U4 1231 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 CCNYQ8ND76 341 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 PUS3Q9BZE2 481 aaKnown RBP18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 DDX47Q9H0S4 455 aaKnown RBP18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 SLC40A1Q9NP59 571 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 TEX33O43247 280 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 XPOTO43592 962 aaKnown RBP18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 PSPC1Q8WXF1 523 aaKnown RBP18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 PCIF1Q9H4Z3 704 aa18.26■□□□□ 0.51
COL4A3BP-203ENST00000380494 PGM1P36871 562 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 SERPINB10P48595 397 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 TMEM154Q6P9G4 183 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 RAD54LQ92698 747 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 GREM2Q9H772 168 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 EHD2Q9NZN4 543 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 FIS1Q9Y3D6 152 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 ZRANB2O95218 330 aaKnown RBP eCLIP18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 KCNA6P17658 529 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 KRT4P19013 534 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 LSP1P33241 339 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 COPS2P61201 443 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 NYAP1Q6ZVC0 841 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 RASSF3Q86WH2 238 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 DCLK2Q8N568 766 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 SUN2Q9UH99 717 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 ZNF711Q9Y462 761 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 ESRRBO95718 433 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 CHN1P15882 459 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 KCNA3P22001 575 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 CDC25AP30304 524 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 MED21Q13503 144 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 MAPRE2Q15555 327 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 XPO6Q96QU8 1125 aaKnown RBP18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 CYP26B1Q9NR63 512 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 GINS2Q9Y248 185 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 PSMD14O00487 310 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 KIF19Q2TAC6 998 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 NUDCD3Q8IVD9 361 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 LCORLQ8N3X6 602 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 METTL13Q8N6R0 699 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 ATP11CQ8NB49 1132 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 CNOT8Q9UFF9 292 aaKnown RBP18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 FAM107AO95990 144 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 PTPN12Q05209 780 aaKnown RBP18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 LONP2Q86WA8 852 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 ZBTB18Q99592 522 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 DCTN4Q9UJW0 460 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 ANAPC7Q9UJX3 599 aa18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 G3BP2Q9UN86 482 aaKnown RBP18.25■□□□□ 0.51
COL4A3BP-203ENST00000380494 LAMC1P11047 1609 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 YEATS2Q9ULM3 1422 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 CCDC137Q6PK04 289 aaKnown RBP18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 SLC26A7Q8TE54 656 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 DNAJC9Q8WXX5 260 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 CYFIP2Q96F07 1278 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 CFAP69A5D8W1 941 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 TCP11X1B4DZS4 312 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 PAMP19021 973 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 TSGA10IPQ3SY00 556 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 TRPM8Q7Z2W7 1104 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 PALMDQ9NP74 551 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 SASH1O94885 1247 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 SERPINB2P05120 415 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 ALAS1P13196 640 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 RNF169Q8NCN4 708 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 TBC1D23Q9NUY8 699 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 HP1BP3Q5SSJ5 553 aaPredicted RBP18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 TBC1D9BQ66K14 1250 aa18.24■□□□□ 0.51
COL4A3BP-203ENST00000380494 IRAK1P51617 712 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 CYLC2Q14093 348 aaPredicted RBP18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 TFDP2Q14188 446 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 KCNB1Q14721 858 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 RFFLQ8WZ73 363 aa18.23■□□□□ 0.51
COL4A3BP-203ENST00000380494 CFAP74Q9C0B2 1584 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms