RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 MYO1AQ9UBC5 1043 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 UBE4BO95155 1302 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 ENC1O14682 589 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 RGS20O76081 388 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 VAV2P52735 878 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 NPEPPSP55786 919 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 GFPT1Q06210 699 aaPredicted RBP13.17□□□□□ -0.3
USP3-202ENST00000380324 TEX35Q5T0J7 233 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 SFMBT2Q5VUG0 894 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 OTUD5Q96G74 571 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 INPP4AQ96PE3 977 aaPredicted RBP13.17□□□□□ -0.3
USP3-202ENST00000380324 HOXC10Q9NYD6 342 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 GCNT4Q9P109 453 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 LARSQ9P2J5 1176 aaKnown RBP13.17□□□□□ -0.3
USP3-202ENST00000380324 PUF60Q9UHX1 559 aaKnown RBP13.17□□□□□ -0.3
USP3-202ENST00000380324 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
USP3-202ENST00000380324 TELO2Q9Y4R8 837 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 PCNTO95613 3336 aa13.17□□□□□ -0.3
USP3-202ENST00000380324 EFCAB8A8MWE9 144 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 TISP43B9A030 160 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
USP3-202ENST00000380324 YBX3P16989 372 aaKnown RBP eCLIP13.16□□□□□ -0.33e-6■■■□□ 16.3
USP3-202ENST00000380324 SFNP31947 248 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 PSMC5P62195 406 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 KIF5AQ12840 1032 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 EXOC3L4Q17RC7 722 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 XKR9Q5GH70 373 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 GADL1Q6ZQY3 521 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 FAM133AQ8N9E0 248 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 RBM46Q8TBY0 533 aaKnown RBP13.16□□□□□ -0.3
USP3-202ENST00000380324 GPRASP2Q96D09 838 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 GANQ9H2C0 597 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 ELP3Q9H9T3 547 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 METTL14Q9HCE5 456 aaKnown RBP13.16□□□□□ -0.3
USP3-202ENST00000380324 ATP2A1O14983 1001 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 TLR2O60603 784 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 PSMC2P35998 433 aaKnown RBP13.16□□□□□ -0.3
USP3-202ENST00000380324 SLC9C1Q4G0N8 1177 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 HGSNATQ68CP4 663 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 MOB2Q70IA6 237 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 C4orf19Q8IY42 314 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 CLMNQ96JQ2 1002 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 EPC1Q9H2F5 836 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 CDC23Q9UJX2 597 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 FHOD1Q9Y613 1164 aa13.16□□□□□ -0.3
USP3-202ENST00000380324 A0A0G2JMZ2 1700 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 IRF6O14896 467 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 PPP1R37O75864 691 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 KCNA2P16389 499 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 SH3D19Q5HYK7 790 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 FAM102BQ5T8I3 360 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 C9orf131Q5VYM1 1079 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 XRRA1Q6P2D8 792 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 ANKRD35Q8N283 1001 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 RDH13Q8NBN7 331 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 MOV10L1Q9BXT6 1211 aaKnown RBP13.15□□□□□ -0.3
USP3-202ENST00000380324 EDEM3Q9BZQ6 932 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 JPH1Q9HDC5 661 aaPredicted RBP13.15□□□□□ -0.3
USP3-202ENST00000380324 HDAC6Q9UBN7 1215 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 GABBR1Q9UBS5 961 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 PCDHA13Q9Y5I0 950 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 PCDHA10Q9Y5I2 948 aa13.15□□□□□ -0.3
USP3-202ENST00000380324 LYPLA2O95372 231 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 TRIM49P0CI25 452 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 TRIM49CP0CI26 452 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 PLS3P13797 630 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 UCHL3P15374 230 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 PON1P27169 355 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 PEX3P56589 373 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 CNTN2Q02246 1040 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 TTLL12Q14166 644 aaPredicted RBP13.14□□□□□ -0.31
USP3-202ENST00000380324 ZNF746Q6NUN9 644 aaPredicted RBP13.14□□□□□ -0.31
USP3-202ENST00000380324 ANO5Q75V66 913 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 MYPNQ86TC9 1320 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 EHBP1Q8NDI1 1231 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 SPAG5Q96R06 1193 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 SYT17Q9BSW7 474 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 KIFC3Q9BVG8 833 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 NUCKS1Q9H1E3 243 aaKnown RBP13.14□□□□□ -0.31
USP3-202ENST00000380324 TULP1O00294 542 aaPredicted RBP13.14□□□□□ -0.31
USP3-202ENST00000380324 EXOC3O60645 756 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 ATP1A1P05023 1023 aaKnown RBP13.14□□□□□ -0.31
USP3-202ENST00000380324 SERPING1P05155 500 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 CHMP4BP1P59074 171 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 SECISBP2LQ93073 1101 aaKnown RBP13.14□□□□□ -0.31
USP3-202ENST00000380324 DRC1Q96MC2 740 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 PAGR1Q9BTK6 254 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 TSGA10Q9BZW7 698 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 PCIF1Q9H4Z3 704 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 MLXIPQ9HAP2 919 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 BTBD7Q9P203 1132 aa13.14□□□□□ -0.31
USP3-202ENST00000380324 SLC16A4O15374 487 aa13.13□□□□□ -0.31
USP3-202ENST00000380324 IREB2P48200 963 aaKnown RBP13.13□□□□□ -0.31
USP3-202ENST00000380324 SOX10P56693 466 aa13.13□□□□□ -0.31
USP3-202ENST00000380324 FSTL1Q12841 308 aa13.13□□□□□ -0.31
USP3-202ENST00000380324 ASIC2Q16515 512 aa13.13□□□□□ -0.31
USP3-202ENST00000380324 GNPTABQ3T906 1256 aa13.13□□□□□ -0.31
USP3-202ENST00000380324 GJB7Q6PEY0 223 aa13.13□□□□□ -0.31
USP3-202ENST00000380324 GBP6Q6ZN66 633 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms