RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 SYT2Q8N9I0 419 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-201ENST00000380152 TMEM206Q9H813 350 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 CYP4F11Q9HBI6 524 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 CCDC87Q9NVE4 849 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 ZFP69BQ9UJL9 534 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 UBE2Q2LH0YL09 131 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 RAD51CO43502 376 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 DKC1O60832 514 aaKnown RBP eCLIP4.5□□□□□ -1.69
BRCA2-201ENST00000380152 FTLP02792 175 aaPredicted RBP4.5□□□□□ -1.69
BRCA2-201ENST00000380152 ESRRGP62508 458 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 KRT80Q6KB66 452 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 NME8Q8N427 588 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 XAB2Q9HCS7 855 aaKnown RBP4.5□□□□□ -1.69
BRCA2-201ENST00000380152 TUBE1Q9UJT0 475 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 ANGPTL2Q9UKU9 493 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 CFAP69A5D8W1 941 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 RANBP1P43487 201 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 DRP2Q13474 957 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 MDH1BQ5I0G3 518 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 ICA1LQ8NDH6 482 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 HSPH1Q92598 858 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 NACC1Q96RE7 527 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 TTC1Q99614 292 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 AMNQ9BXJ7 453 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 IQANK1A0A1B0GTG1 560 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 SLC35G2Q8TBE7 412 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 PPP1R36Q96LQ0 422 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 SERPINB13Q9UIV8 391 aa4.5□□□□□ -1.69
BRCA2-201ENST00000380152 ZNF746Q6NUN9 644 aaPredicted RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 DARS2Q6PI48 645 aaKnown RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 WDR75Q8IWA0 830 aaKnown RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 NT5C1BQ96P26 610 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 NUDCD1Q96RS6 583 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 GINM1Q9NU53 330 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 RGPD8O14715 1765 aaPredicted RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 PXDNLA1KZ92 1463 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 GOLGA8IPA6NC78 632 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 GOLGA8JA6NMD2 632 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 MT-ND3P03897 115 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 SNAP25P60880 206 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 ATG16L1Q676U5 607 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 RNF207Q6ZRF8 634 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 RGS9BPQ6ZS82 235 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 DDX42Q86XP3 938 aaKnown RBP eCLIP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 DNAAF3Q8N9W5 541 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 GOLPH3Q9H4A6 298 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 A6NJR5 290 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 GSG1L2A8MUP6 293 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 IPO5O00410 1097 aaKnown RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 PSMD14O00487 310 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 POLR2BP30876 1174 aaKnown RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 CASP2P42575 452 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 IL1RL1Q01638 556 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 TRIM50Q86XT4 487 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 SCYL1Q96KG9 808 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 TMEM60Q9H2L4 133 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 TMOD4Q9NZQ9 345 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 CASZ1Q86V15 1759 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 CHD4Q14839 1912 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 WDR64B1ANS9 1081 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 POLR2MP0CAP2 368 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 SRGNP10124 158 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 YARSP54577 528 aaKnown RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 NCAPHQ15003 741 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 KNOP1Q1ED39 458 aaKnown RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 TBC1D22AQ8WUA7 517 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 SAYSD1Q9NPB0 183 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 PLEKHG1Q9ULL1 1385 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 POTEFA5A3E0 1075 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 CAND2O75155 1236 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 CPP00450 1065 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 POTEIP0CG38 1075 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 ERFEQ4G0M1 354 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 POTEGQ6S5H5 508 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 POTEEQ6S8J3 1075 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 KIF2BQ8N4N8 673 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 CCNYQ8ND76 341 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 C1orf54Q8WWF1 131 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 RUBCNQ92622 972 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 GLG1Q92896 1179 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 SLC40A1Q9NP59 571 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 GEMIN8Q9NWZ8 242 aaKnown RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 hCG_2014768A0A024R1R8 64 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 USP17L15C9J2P7 530 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 USP17L13C9JLJ4 530 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 USP17L11C9JVI0 530 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 USP17L18D6R9N7 530 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 USP17L22D6RA61 530 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 USP17L17D6RBQ6 530 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 USP17L19D6RCP7 530 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 USP17L20D6RJB6 530 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 DNAJC6O75061 913 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 SKAP2O75563 359 aaPredicted RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 PLEKP08567 350 aaPredicted RBP4.49□□□□□ -1.69
BRCA2-201ENST00000380152 ALDH1B1P30837 517 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 CDK8P49336 464 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 GABPAQ06546 454 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 USP17L24Q0WX57 530 aa4.49□□□□□ -1.69
BRCA2-201ENST00000380152 DHX34Q14147 1143 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms