RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 FLOT1O75955 427 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 FKBP1AP62942 108 aaKnown RBP13.27□□□□□ -0.29
RFC3-201ENST00000380071 GNGT1P63211 74 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 LRCH2Q5VUJ6 765 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 U2AF1L4Q8WU68 220 aaKnown RBP13.27□□□□□ -0.29
RFC3-201ENST00000380071 SCFD2Q8WU76 684 aa13.27□□□□□ -0.29
RFC3-201ENST00000380071 GRIN2DO15399 1336 aa13.26□□□□□ -0.29
RFC3-201ENST00000380071 CFAP58Q5T655 872 aa13.26□□□□□ -0.29
RFC3-201ENST00000380071 FAM186BQ8IYM0 893 aa13.26□□□□□ -0.29
RFC3-201ENST00000380071 LNX1Q8TBB1 728 aaPredicted RBP13.26□□□□□ -0.29
RFC3-201ENST00000380071 FIZ1Q96SL8 496 aa13.26□□□□□ -0.29
RFC3-201ENST00000380071 FBXL5Q9UKA1 691 aa13.26□□□□□ -0.29
RFC3-201ENST00000380071 TMCO5BA8MYB1 307 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 EVI5O60447 810 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 H2AFZP0C0S5 128 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 PSMC2P35998 433 aaKnown RBP13.25□□□□□ -0.29
RFC3-201ENST00000380071 STAT2P52630 851 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 ERVK-9P63128 1117 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 TNNC1P63316 161 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
RFC3-201ENST00000380071 H2AFVQ71UI9 128 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 DDX42Q86XP3 938 aaKnown RBP eCLIP13.25□□□□□ -0.29
RFC3-201ENST00000380071 OLIG1Q8TAK6 271 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 AKT1S1Q96B36 256 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 PBKQ96KB5 322 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.25□□□□□ -0.29
RFC3-201ENST00000380071 CES2O00748 559 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 GAP43P17677 238 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 ATP1A2P50993 1020 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 GALCP54803 685 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 CBWD6Q4V339 395 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 CBWD3Q5JTY5 395 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 CBWD5Q5RIA9 395 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 ZNF720Q7Z2F6 126 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 ACTRT1Q8TDG2 376 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.25□□□□□ -0.29
RFC3-201ENST00000380071 PARVGQ9HBI0 331 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 TUFT1Q9NNX1 390 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 OSGEPQ9NPF4 335 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 STXBP5LQ9Y2K9 1186 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 KIF13BQ9NQT8 1826 aa13.25□□□□□ -0.29
RFC3-201ENST00000380071 SHTN1A0MZ66 631 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 GTPBP10A4D1E9 387 aaKnown RBP13.24□□□□□ -0.29
RFC3-201ENST00000380071 TCP10L2B9ZVM9 353 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 EIF3DO15371 548 aaKnown RBP eCLIP13.24□□□□□ -0.29
RFC3-201ENST00000380071 EIF3HO15372 352 aaKnown RBP eCLIP13.24□□□□□ -0.29
RFC3-201ENST00000380071 ARP10275 920 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 ITGA4P13612 1032 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 ECHS1P30084 290 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 STAT1P42224 750 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 CCT5P48643 541 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 CYP2J2P51589 502 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 PPP2R5CQ13362 524 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 IFI16Q16666 785 aaKnown RBP13.24□□□□□ -0.29
RFC3-201ENST00000380071 PEX26Q7Z412 305 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 SLFN11Q7Z7L1 901 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 SLC30A5Q8TAD4 765 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 BCAS4Q8TDM0 211 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 DDX47Q9H0S4 455 aaKnown RBP13.24□□□□□ -0.29
RFC3-201ENST00000380071 DNAJC12Q9UKB3 198 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 ATRNL1Q5VV63 1379 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 SART1O43290 800 aaKnown RBP13.24□□□□□ -0.29
RFC3-201ENST00000380071 ENTPD3O75355 529 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 TRIM49P0CI25 452 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 TRIM49CP0CI26 452 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 CHRNA5P30532 468 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 FMO5P49326 533 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 DRAP1Q14919 205 aaPredicted RBP13.24□□□□□ -0.29
RFC3-201ENST00000380071 DAAM2Q86T65 1068 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 GLYCTKQ8IVS8 523 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 MREGQ8N565 214 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 RDH13Q8NBN7 331 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 BANK1Q8NDB2 785 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 SLC5A5Q92911 643 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 UNC45AQ9H3U1 944 aa13.24□□□□□ -0.29
RFC3-201ENST00000380071 TAF1DQ9H5J8 278 aaPredicted RBP13.24□□□□□ -0.29
RFC3-201ENST00000380071 NOC2LQ9Y3T9 749 aaKnown RBP13.24□□□□□ -0.29
RFC3-201ENST00000380071 CLRN2A0PK11 232 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 F8VZ95 297 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 GCOM1H8Y6P7 765 aaPredicted RBP13.23□□□□□ -0.29
RFC3-201ENST00000380071 GAS7O60861 476 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 POLR2MP0CAP2 368 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 FERP16591 822 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 SOX5P35711 763 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 PRELPP51888 382 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 SKOR1P84550 965 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 PDCLQ13371 301 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 HLTFQ14527 1009 aaKnown RBP eCLIP13.23□□□□□ -0.29
RFC3-201ENST00000380071 PLS1Q14651 629 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 ZYXQ15942 572 aaKnown RBP13.23□□□□□ -0.29
RFC3-201ENST00000380071 SLC15A2Q16348 729 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 NT5DC3Q86UY8 548 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 VPS36Q86VN1 386 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 WHAMMQ8TF30 809 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.23□□□□□ -0.296e-10■□□□□ 8.5
RFC3-201ENST00000380071 GPR88Q9GZN0 384 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 ISCUQ9H1K1 167 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 NEUROG2Q9H2A3 272 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 SLX4Q8IY92 1834 aa13.23□□□□□ -0.29
RFC3-201ENST00000380071 YDJCA8MPS7 323 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms