RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 ORC2Q13416 577 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-201ENST00000379433 FAM102BQ5T8I3 360 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 SEPT14Q6ZU15 432 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 KLHL23Q8NBE8 558 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 SPAG5Q96R06 1193 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 FOCADQ5VW36 1801 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 K7ENM7 598 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 PSMD10O75832 226 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 AKAP3O75969 853 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 ITGB3BPQ13352 177 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-201ENST00000379433 CRYGNQ8WXF5 182 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 JAKMIP2Q96AA8 810 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 GDAP1L1Q96MZ0 367 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 MXRA8Q9BRK3 442 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 MLXIPQ9HAP2 919 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 ARMCX3Q9UH62 379 aaPredicted RBP11.83□□□□□ -0.52
NEDD9-201ENST00000379433 CAPN11Q9UMQ6 739 aa11.83□□□□□ -0.52
NEDD9-201ENST00000379433 REXO2Q9Y3B8 237 aaKnown RBP11.83□□□□□ -0.52
NEDD9-201ENST00000379433 CTAGE9A4FU28 777 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 VWA5AO00534 786 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 WDR46O15213 610 aaKnown RBP11.82□□□□□ -0.52
NEDD9-201ENST00000379433 USP8P40818 1118 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 PTGER2P43116 358 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 APLP1P51693 650 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 LRRC63Q05C16 580 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 KNOP1Q1ED39 458 aaKnown RBP11.82□□□□□ -0.52
NEDD9-201ENST00000379433 XKR9Q5GH70 373 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 DCAF15Q66K64 600 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 IRF2BPLQ9H1B7 796 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 ELP3Q9H9T3 547 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 PPP1R9AQ9ULJ8 1098 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 HIP1RO75146 1068 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 ZMYND10O75800 440 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 UGCGQ16739 394 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 TKFCQ3LXA3 575 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 ANKRD35Q8N283 1001 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 CAGE1Q8TC20 777 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 CLEC4DQ8WXI8 215 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 ERO1AQ96HE7 468 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 CLMNQ96JQ2 1002 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 IFIH1Q9BYX4 1025 aaKnown RBP11.82□□□□□ -0.52
NEDD9-201ENST00000379433 PARVGQ9HBI0 331 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 SMARCAL1Q9NZC9 954 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 TMOD4Q9NZQ9 345 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 ADAMTS1Q9UHI8 967 aa11.82□□□□□ -0.52
NEDD9-201ENST00000379433 TULP2O00295 520 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 ZNF185O15231 689 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 OATP04181 439 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 CNTN2Q02246 1040 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 FSTL1Q12841 308 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 PADI6Q6TGC4 694 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 NCAPG2Q86XI2 1143 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 UHMK1Q8TAS1 419 aaKnown RBP11.81□□□□□ -0.52
NEDD9-201ENST00000379433 HSD17B14Q9BPX1 270 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 NAA15Q9BXJ9 866 aaKnown RBP11.81□□□□□ -0.52
NEDD9-201ENST00000379433 SLC38A10Q9HBR0 1119 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 CTIFO43310 598 aaKnown RBP11.81□□□□□ -0.52
NEDD9-201ENST00000379433 TBC1D12O60347 775 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 EYA4O95677 639 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 NR3C1P04150 777 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 XRCC5P13010 732 aaKnown RBP11.81□□□□□ -0.52
NEDD9-201ENST00000379433 GTF2F1P35269 517 aaKnown RBP eCLIP11.81□□□□□ -0.527e-8■■■□□ 19.1
NEDD9-201ENST00000379433 CYLC1P35663 651 aaPredicted RBP11.81□□□□□ -0.52
NEDD9-201ENST00000379433 PEX3P56589 373 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 ZBED6P86452 979 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 ARHGAP44Q17R89 818 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 SCYL3Q8IZE3 742 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 ZSWIM2Q8NEG5 633 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 CCDC127Q96BQ5 260 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 GOLPH3Q9H4A6 298 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 GPRC5DQ9NZD1 345 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 PGAP2Q9UHJ9 254 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 QSER1Q2KHR3 1735 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 KIF3CO14782 793 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 SLC16A4O15374 487 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 EXOC3O60645 756 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 LRRN2O75325 713 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 GUCY2CP25092 1073 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 HOXD13P35453 343 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 HERVK_113P62684 666 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 KCNMA1Q12791 1236 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 TRIM14Q14142 442 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 TREML2Q5T2D2 321 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 FKBP1CQ5VVH2 108 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 C11orf96Q7Z7L8 435 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 SULF1Q8IWU6 871 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 KIAA1683Q9H0B3 1180 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 R3HDMLQ9H3Y0 253 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 ARHGAP20Q9P2F6 1191 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 SYNPO2Q9UMS6 1093 aa11.81□□□□□ -0.52
NEDD9-201ENST00000379433 ITIH6Q6UXX5 1313 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 MOCS3O95396 460 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 SETSIPP0DME0 302 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 PSMD2Q13200 908 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 CYFIP1Q7L576 1253 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 TAF4BQ92750 862 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 NACC1Q96RE7 527 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 CLEC11AQ9Y240 323 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 GOLGA6L9A6NEM1 432 aa11.8□□□□□ -0.52
NEDD9-201ENST00000379433 FZD9O00144 591 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms