RNA–Protein interactions for RNA: ENST00000379055.5

TPT1-202, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 2 BASIC

Gene TPT1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-202ENST00000379055 NR5A1Q13285 461 aa28.21■■■□□ 2.11
TPT1-202ENST00000379055 GPM6BQ13491 265 aa28.21■■■□□ 2.11
TPT1-202ENST00000379055 MTERF2Q49AM1 385 aa28.21■■■□□ 2.11
TPT1-202ENST00000379055 FAM43BQ6ZT52 329 aaPredicted RBP28.21■■■□□ 2.11
TPT1-202ENST00000379055 RTN4RL1Q86UN2 441 aaPredicted RBP28.21■■■□□ 2.11
TPT1-202ENST00000379055 BANK1Q8NDB2 785 aa28.21■■■□□ 2.11
TPT1-202ENST00000379055 ERVK-5Q9HDB9 667 aa28.21■■■□□ 2.11
TPT1-202ENST00000379055 RNF216Q9NWF9 866 aaPredicted RBP28.21■■■□□ 2.11
TPT1-202ENST00000379055 ST3GAL5Q9UNP4 418 aa28.21■■■□□ 2.11
TPT1-202ENST00000379055 DDX11L8A8MPP1 907 aa28.2■■■□□ 2.1
TPT1-202ENST00000379055 DKC1O60832 514 aaKnown RBP eCLIP28.2■■■□□ 2.11e-323■■■■□ 26.4
TPT1-202ENST00000379055 NLRP11P59045 1033 aaKnown RBP28.2■■■□□ 2.1
TPT1-202ENST00000379055 ZNF710Q8N1W2 664 aa28.2■■■□□ 2.1
TPT1-202ENST00000379055 TMEM40Q8WWA1 233 aa28.2■■■□□ 2.1
TPT1-202ENST00000379055 KCNMB3Q9NPA1 279 aa28.2■■■□□ 2.1
TPT1-202ENST00000379055 COG5Q9UP83 839 aa28.2■■■□□ 2.1
TPT1-202ENST00000379055 NLRC5Q86WI3 1866 aa28.2■■■□□ 2.1
TPT1-202ENST00000379055 TRANK1O15050 2925 aa28.2■■■□□ 2.1
TPT1-202ENST00000379055 TBX3O15119 743 aa28.19■■■□□ 2.1
TPT1-202ENST00000379055 PSMC5P62195 406 aa28.19■■■□□ 2.1
TPT1-202ENST00000379055 B3GNT9Q6UX72 402 aa28.19■■■□□ 2.1
TPT1-202ENST00000379055 ADAM2Q99965 735 aa28.19■■■□□ 2.1
TPT1-202ENST00000379055 TMX1Q9H3N1 280 aa28.19■■■□□ 2.1
TPT1-202ENST00000379055 PCDHB7Q9Y5E2 793 aa28.19■■■□□ 2.1
TPT1-202ENST00000379055 COL4A6Q14031 1691 aa28.19■■■□□ 2.1
TPT1-202ENST00000379055 H3BNC9 293 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 GPR32O75388 356 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 DGKIO75912 1065 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 MMP1P03956 469 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 DNM2P50570 870 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 PPP2R5CQ13362 524 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 SAFBQ15424 915 aaKnown RBP eCLIP28.18■■■□□ 2.1
TPT1-202ENST00000379055 POTEDQ86YR6 584 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 CCDC83Q8IWF9 413 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 DIS3L2Q8IYB7 885 aaKnown RBP28.18■■■□□ 2.1
TPT1-202ENST00000379055 SLFN12Q8IYM2 578 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 HLA-CQ95604 372 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 C1orf112Q9NSG2 853 aa28.18■■■□□ 2.1
TPT1-202ENST00000379055 RALGAPA2Q2PPJ7 1873 aa28.17■■■□□ 2.1
TPT1-202ENST00000379055 SARSP49591 514 aaKnown RBP28.17■■■□□ 2.1
TPT1-202ENST00000379055 C8orf34Q49A92 452 aa28.17■■■□□ 2.1
TPT1-202ENST00000379055 PAN2Q504Q3 1202 aaKnown RBP28.17■■■□□ 2.1
TPT1-202ENST00000379055 EARS2Q5JPH6 523 aaKnown RBP28.17■■■□□ 2.1
TPT1-202ENST00000379055 FAM228AQ86W67 206 aa28.17■■■□□ 2.1
TPT1-202ENST00000379055 ZNF689Q96CS4 500 aaPredicted RBP28.17■■■□□ 2.1
TPT1-202ENST00000379055 MRPL38Q96DV4 380 aaKnown RBP28.17■■■□□ 2.1
TPT1-202ENST00000379055 NIFKQ9BYG3 293 aaKnown RBP28.17■■■□□ 2.1
TPT1-202ENST00000379055 CUL9Q8IWT3 2517 aa28.17■■■□□ 2.1
TPT1-202ENST00000379055 FAM205CA6NFA0 338 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 BTBD18B2RXH4 712 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 EML1O00423 815 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 RB1P06400 928 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 BMPR1AP36894 532 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 QARSP47897 775 aaKnown RBP28.16■■■□□ 2.1
TPT1-202ENST00000379055 TFF2Q03403 129 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 NCAPH2Q6IBW4 605 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 CMTR2Q8IYT2 770 aaKnown RBP28.16■■■□□ 2.1
TPT1-202ENST00000379055 LINC01465Q8N7H1 131 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 NLRP7Q8WX94 980 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 ZNF668Q96K58 619 aaPredicted RBP28.16■■■□□ 2.1
TPT1-202ENST00000379055 ZSCAN31Q96LW9 406 aaPredicted RBP28.16■■■□□ 2.1
TPT1-202ENST00000379055 SH2D3AQ9BRG2 576 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 C11orf84Q9BUA3 381 aaPredicted RBP28.16■■■□□ 2.1
TPT1-202ENST00000379055 VAV3Q9UKW4 847 aa28.16■■■□□ 2.1
TPT1-202ENST00000379055 TMEM150BA6NC51 233 aa28.15■■■□□ 2.1
TPT1-202ENST00000379055 ZSCAN20P17040 1043 aaPredicted RBP28.15■■■□□ 2.1
TPT1-202ENST00000379055 TARBP2Q15633 366 aaKnown RBP28.15■■■□□ 2.1
TPT1-202ENST00000379055 SLC24A5Q71RS6 500 aa28.15■■■□□ 2.1
TPT1-202ENST00000379055 JPH2Q9BR39 696 aaPredicted RBP28.15■■■□□ 2.1
TPT1-202ENST00000379055 RC3H2Q9HBD1 1191 aaKnown RBP28.15■■■□□ 2.1
TPT1-202ENST00000379055 RGS18Q9NS28 235 aa28.15■■■□□ 2.1
TPT1-202ENST00000379055 MGEA5O60502 916 aa28.14■■■□□ 2.1
TPT1-202ENST00000379055 P4HBP07237 508 aaKnown RBP28.14■■■□□ 2.1
TPT1-202ENST00000379055 EIF4BP23588 611 aaKnown RBP28.14■■■□□ 2.1
TPT1-202ENST00000379055 CDC42EP1Q00587 391 aa28.14■■■□□ 2.1
TPT1-202ENST00000379055 TIGD5Q53EQ6 642 aa28.14■■■□□ 2.1
TPT1-202ENST00000379055 HAS1Q92839 578 aa28.14■■■□□ 2.1
TPT1-202ENST00000379055 TNFRSF25Q93038 417 aa28.14■■■□□ 2.1
TPT1-202ENST00000379055 GPC3P51654 580 aa28.13■■■□□ 2.09
TPT1-202ENST00000379055 GUCY1B3Q02153 619 aa28.13■■■□□ 2.09
TPT1-202ENST00000379055 EPHA7Q15375 998 aa28.13■■■□□ 2.09
TPT1-202ENST00000379055 CALCRLQ16602 461 aa28.13■■■□□ 2.09
TPT1-202ENST00000379055 CLP1Q92989 425 aaKnown RBP28.13■■■□□ 2.09
TPT1-202ENST00000379055 C8orf76Q96K31 380 aa28.13■■■□□ 2.09
TPT1-202ENST00000379055 LLPHQ9BRT6 129 aaKnown RBP28.13■■■□□ 2.09
TPT1-202ENST00000379055 ADAMTS10Q9H324 1103 aa28.13■■■□□ 2.09
TPT1-202ENST00000379055 ST3GAL1Q11201 340 aa28.12■■■□□ 2.09
TPT1-202ENST00000379055 SPOUT1Q5T280 376 aaKnown RBP28.12■■■□□ 2.09
TPT1-202ENST00000379055 PLA2G4FQ68DD2 849 aa28.12■■■□□ 2.09
TPT1-202ENST00000379055 FAM184AQ8NB25 1140 aa28.12■■■□□ 2.09
TPT1-202ENST00000379055 ADAMTS19Q8TE59 1207 aa28.12■■■□□ 2.09
TPT1-202ENST00000379055 GCOM2Q9BZD3 368 aaPredicted RBP28.12■■■□□ 2.09
TPT1-202ENST00000379055 UPF2Q9HAU5 1272 aaKnown RBP28.12■■■□□ 2.09
TPT1-202ENST00000379055 ATP6V0A4Q9HBG4 840 aa28.12■■■□□ 2.09
TPT1-202ENST00000379055 SH2B1Q9NRF2 756 aaPredicted RBP28.12■■■□□ 2.09
TPT1-202ENST00000379055 MRPL42Q9Y6G3 142 aaKnown RBP28.12■■■□□ 2.09
TPT1-202ENST00000379055 C5orf67F2Z3F1 127 aa28.11■■■□□ 2.09
TPT1-202ENST00000379055 STBD1O95210 358 aa28.11■■■□□ 2.09
TPT1-202ENST00000379055 GNL2Q13823 731 aaKnown RBP28.11■■■□□ 2.09
TPT1-202ENST00000379055 ANO5Q75V66 913 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms